Clavibacter michiganensis subsp. michiganensis: CMM_1363
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Entry
CMM_1363 CDS
T00529
Symbol
ffhA
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi02024
Quorum sensing
cmi03060
Protein export
cmi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CMM_1363 (ffhA)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CMM_1363 (ffhA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMM_1363 (ffhA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
cmi02044
]
CMM_1363 (ffhA)
Enzymes [BR:
cmi01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CMM_1363 (ffhA)
Secretion system [BR:
cmi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CMM_1363 (ffhA)
Eukaryotic Sec-SRP protein
CMM_1363 (ffhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
cobW
Zeta_toxin
MMR_HSR1
AAA_24
nSTAND3
AAA_31
APS_kinase
ArsA_ATPase
AAA_18
AAA_33
TsaE
nSTAND_NTPase7
6PF2K
AAA_30
AAA_17
Motif
Other DBs
NCBI-ProteinID:
CAN01408
UniProt:
A5CQQ4
LinkDB
All DBs
Position
1544729..1546300
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AA seq
523 aa
AA seq
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MATFGTLSDRLAETFKNLRGKGKLSAADVDGTVREIRRALLEADVALDVVKAFTASVRER
ALGGEVSQALNPAQQVVQIVNEELVGILGGQQRRIQFAKKPPTVIMLAGLQGAGKTTLAG
KLGKWLAKDGHTPMLVAADLQRPNAVQQLQVVGEQAGVPVFAPEPGNGKGNPVRVTKDAM
KHAIDKQYSVVIIDTAGRLGVDAELMKQAADIRKATDPDEVLFVIDAMIGQDAVATAKAF
QDGVDFTGVVLSKLDGDARGGAALSVASVTGRPIMFASTGEGLDDFEPFHPDRMASRILD
LGDILTLIEQAQQAFDEEEAMEVAQKLASDTFTLDDFLKQMQQLRGKGSLKKMMGMLPGM
GAMKEQLENFDEKEIVRTEAIIQSMTKAERQNPKLLNGSRRLRIARGSGMTVTDVNGLVQ
RFEQASKMMRTVARGGMPQIPGMGPMPGAHSGRKPVQQKKKGSKSGNPAKRAQENAALAS
GQRIGGPAAPAGSGFGLAGAAKGGADGAPSEEELASLQKFLGR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttcggaacactctcggaccgcctcgccgagaccttcaagaacctgcgcggc
aagggcaagctcagcgccgcggacgtcgacggcaccgtccgcgagatccgccgcgcgctg
ctcgaggccgacgtcgcgctcgacgtcgtcaaggcgttcaccgcgtccgtccgcgagcgc
gccctcggcggcgaggtcagccaggcgctgaaccccgcccagcaggtcgtgcagatcgtc
aacgaggagctcgtcgggatcctgggcggccagcagcgccgcatccagttcgccaagaag
ccgccgaccgtcatcatgctcgcgggcctccagggcgcgggcaagacgaccctcgcgggc
aagctcggcaagtggctcgcgaaggacggccacacgccgatgctcgtcgcggccgacctc
cagcgccccaacgccgtgcagcagctgcaggtcgtcggcgagcaggcgggcgtccccgtc
ttcgcgcccgagcccggcaacggcaagggcaaccccgtccgcgtcaccaaggacgcgatg
aagcacgcgatcgacaagcagtacagcgtcgtcatcatcgacaccgcgggccgcctcggc
gtcgacgcggagctgatgaagcaggccgcggacatccgcaaggccaccgaccccgacgag
gtcctcttcgtcatcgacgccatgatcggccaggacgcggtcgcgaccgcgaaggcgttc
caggacggcgtcgacttcacgggcgtcgtgctctccaagctcgacggcgacgcgcgcgga
ggagcggccctctcggtcgcctccgtcaccggccgcccgatcatgttcgcctccacgggc
gagggcctcgacgacttcgagcccttccaccccgaccgcatggcgagccgcatcctcgac
ctcggcgacatcctcaccctcatcgagcaggcccagcaggccttcgacgaggaggaggcg
atggaggtcgcccagaagctcgcgagcgacaccttcacgctcgacgacttcctcaagcag
atgcagcagctgcgcggcaagggctccctcaagaagatgatgggcatgctccccggcatg
ggcgccatgaaggagcagctggagaacttcgacgagaaggagatcgtccgcaccgaggcg
atcatccagtcgatgacgaaggccgagcggcagaacccgaagctgctcaacggctcgcgt
cggctccgcatcgcgcgcggatccggtatgaccgtcaccgacgtcaacggcctcgtgcag
cgcttcgagcaggcgtcgaagatgatgcgcacggtcgcccgcggcggcatgccgcagatc
cccgggatgggcccgatgccgggcgcgcactcgggccgcaagcccgtgcagcagaagaag
aagggctcgaagtcgggcaacccggccaagcgcgcgcaggagaacgcggcgctcgcgtcg
ggccagcgcatcggcggccccgctgctcccgcgggatccggcttcggcctcgccggggcg
gccaagggcggcgcggacggcgccccgagcgaggaggagctcgcctcgctgcagaagttc
ctcgggcgctga
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