Clavibacter michiganensis subsp. michiganensis: CMM_1550
Help
Entry
CMM_1550 CDS
T00529
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03030
DNA replication
cmi03430
Mismatch repair
cmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMM_1550 (holA)
03430 Mismatch repair
CMM_1550 (holA)
03440 Homologous recombination
CMM_1550 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmi03032
]
CMM_1550 (holA)
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_1550 (holA)
Enzymes [BR:
cmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMM_1550 (holA)
DNA replication proteins [BR:
cmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CMM_1550 (holA)
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CMM_1550 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CAN01597
UniProt:
A5CR92
LinkDB
All DBs
Position
1756230..1757258
Genome browser
AA seq
342 aa
AA seq
DB search
MATRTSRSTAAKPSAAIPQLSWDAVRPAPIVLVSGTEALLADRAMRRLRDILTAEDPRIE
VSDIEADSYAPGELITLASPSLFAEPRLIRVVNVEKSSDQFLLDAVAYLDQPADDTYVVL
RHAGGVRGKKLLDAVRAGTGGGIEVVCAELKKDSEKHDFAVAEFRAAKRSITPGAVRQLV
AAFQDDVSELASACQQLISDTAHEITEVTVDQYYGGRVEINAFAVADSAIAGRGGEALVL
LRHALTSGADPVPLIAAFAMKIRTMAKVSGVSGASGQLASKLGMAPWQVDRARRDLQLWD
DAGLGRAIEALAEADAQVKGGGRDPVYSLERMVRTVASRGRD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaggacgtcccgcagcacggcggcgaagccctccgcggccatcccgcagctc
tcctgggacgcggtgcggccggcgcccatcgtcctcgtgtccggcaccgaggccctcctc
gccgaccgggcgatgcgacgcctccgcgacatcctcacggcggaggacccccgcatcgag
gtctccgacatcgaggccgactcctacgcgcccggcgagctcatcacgctcgcgagcccg
tccctgttcgcggagccgcggctcatccgggtcgtgaacgtggagaagagctcggaccag
ttcctgctcgacgcggtggcgtacctcgaccagcccgccgacgacacctacgtcgtgctg
aggcacgccgggggagtgcgcggcaagaagttgctcgacgccgtgcgcgcgggcaccggc
ggcggcatcgaggtcgtctgcgcggagctcaagaaggacagcgagaagcacgacttcgcc
gtggccgagttccgggccgcgaagcgctcgatcacgccgggcgcggtgcggcagctcgtg
gccgccttccaggacgacgtgagcgagctcgcgtcggcgtgccagcagctcatctcggac
accgcgcacgagatcaccgaggtcacggtcgaccagtactacggcgggcgggtcgagatc
aacgccttcgcggtcgcggactcggcgatcgccggccgcggcggcgaggcgctcgtcctg
ctccgccacgcgctcacctcgggcgcggaccccgtgccgctcatcgccgccttcgcgatg
aagatccgcacgatggccaaggtctcgggggtctcgggcgcgtcgggccagctggcgtcg
aagctcggcatggcaccgtggcaggtcgatcgcgcccgccgcgacctgcagctctgggac
gacgcgggtctcggccgggccatcgaggccctcgccgaggcggacgcgcaggtgaagggc
ggcggacgcgaccccgtctactcgctggagcgcatggtgcgcaccgtcgcctcgcgcggc
cgggactga
DBGET
integrated database retrieval system
