Clavibacter michiganensis subsp. michiganensis: CMM_1749
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Entry
CMM_1749 CDS
T00529
Symbol
uvrA
Name
(GenBank) putative exinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CMM_1749 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_1749 (uvrA)
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMM_1749 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CMM_1749 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
CAN01805
UniProt:
A5CRU2
LinkDB
All DBs
Position
complement(1976611..1979532)
Genome browser
AA seq
973 aa
AA seq
DB search
MSISPVESSSLLSVRGARVHNLRDVDLDIPRDSLVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIFDYMRLLW
ARIGVAHCPVCGERISRQTVQQIADQLMELETGTRYQVVSPIVSQKKGEFVDLFAELASG
GYSRAIVDGELIQLSSPPKLKKQYKHDISVVVDRLVASDDILGRLTDSLETALRLTDGIV
MIDFVDVDGPGGLRTYSEKLSCPNNHPIQLTEIEPRTFSFNAPFGACPECSGLGTRMSVD
QELLIGDESLSIADGVILPWTTQGKGLFQYYEKLLAGLARDLKFSLTTPWRKLSEEVREA
VLRGNDFEVQVKWKNRYGREMTYSSGFEGVMPYIERQFAQAETDNQRARWGEYLREIPCP
VCDGKRLKPEVLAVLVHGANIADVAEMSLSDAQEFMAQLELTDREAHIAAQVLREIRVRL
EFLIEVGLNYLNLARAAASLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IETLVKLRDLGNTLIVVEHDEDTIRTADWIVDIGPGAGVNGGKVVHSGSYEGLIENRESL
TGDYLAGRRAIATPVKRRKIDKKRQIQVVGARANNLQNVTATFPLGTLTAVTGVSGSGKS
SLVNDILYRVLANELNGARKVPGKHSRVTGLENLDKVVHVDQNPIGRTPRSNPATYTGVF
DRIRNLFAETTEAKARGYLPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVACEVCGG
ARYNRDTLSVHYKGKSIAEVLDMSISEAAEFFEPIQAIHRFMKTLVDVGLGYVRLGQSAT
TLSGGEAQRVKLSTELQRRSNGRSIYVLDEPTTGLHFEDVRKLLLVLNGLVDKGNTVIVI
EHNLDVIKSADWLIDMGPEGGAGGGTVLATGTPEHLATVPESYTGGFLKEVLDAEAEASA
VASQRAREERAAG
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaatctcccccgtcgagtcctcctccctcctcagcgtgcgcggcgcccgcgtccac
aacctccgcgatgtcgacctcgacatcccgcgcgactcgctcgtcgtcttcacgggcctg
tcggggtccggcaagtcgtcgctcgcgttcgacacgatcttcgccgagggccagcgccgc
tacgtcgagtcgctgtccgcgtacgcgcgccagttcctcggccaggtcgaccggccggac
gtcgacttcatcgagggcctgagccccgcggtctccatcgaccagaagtcgacgaaccgc
aacccgcgctcgacggtgggcaccatcaccgagatcttcgactacatgcgcctgctctgg
gcgcgcatcggcgtcgcgcactgccccgtgtgcggcgagcgcatctcccgacagaccgtg
cagcagatcgccgaccagctcatggagctcgagaccggcaccaggtaccaggtcgtcagc
cccatcgtgtcgcagaagaagggcgagttcgtcgacctgttcgcggagctcgcctccggc
ggctactcccgcgccatcgtcgacggcgagctcatccagctcagctcgccgcccaagctc
aagaagcagtacaagcacgacatctcggtcgtggtcgaccgcctggtcgcgagcgacgac
atcctcgggcgcctgacggactcgctcgagaccgcgctccggctcaccgacggcatcgtg
atgatcgacttcgtcgacgtcgacggccccggaggcctgcggacgtactccgagaagctg
tcctgcccgaacaaccaccccatccagctcaccgagatcgagccgcgcaccttctcgttc
aacgcgcccttcggcgcatgccccgagtgctcgggtctcggcacgcgcatgtcggtggac
caggagctgctcatcggcgacgagtccctgagcatcgccgacggcgtcatcctcccgtgg
accacgcagggcaagggcctcttccagtactacgagaagctgctggcgggcctcgcgcgc
gacctcaagttctcgctcaccacgccatggcggaagctgtccgaggaggtccgcgaggcg
gtcctccggggcaacgacttcgaggtccaggtcaagtggaagaaccgctacggccgcgag
atgacctactcgtccggcttcgagggcgtcatgccctacatcgagcgccagttcgcgcag
gcggagaccgacaaccagcgtgcgcgctggggcgagtacctccgcgagatcccctgcccg
gtctgcgacggcaagcggctgaagcccgaggtcctcgcggtgctcgtgcacggcgcgaac
atcgccgacgtcgccgagatgagcctctcggacgcgcaggagttcatggcgcagctcgag
ctgaccgaccgcgaggcgcacatcgccgcgcaggtgctgcgggagatccgcgtgcggctc
gagttcctcatcgaggtcggcctgaactacctcaacctcgcgcgggcggcggcctcgctc
tccggcggcgaggcgcagcgcatccgcctggcgacgcagatcggctcggggctcacgggg
gtgctctacgtgctggacgagccgtccatcggcctgcatcagcgcgacaaccggcgcctc
atcgagacgctggtcaagctgcgcgacctcggcaacacgctcatcgtcgtcgagcacgac
gaggacaccatccgcaccgccgactggatcgtcgacatcggtcccggcgcgggcgtcaac
ggcggcaaggtcgtgcactcgggctcctatgagggcctcatcgagaaccgcgagtcgctc
acgggcgactacctcgccggccgccgcgccatcgcgacgcccgtgaagcgccggaagatc
gacaagaagcggcagatccaggtcgtcggcgcgcgcgccaacaacctgcagaacgtgacc
gcgacgttcccgctcggcacgctcacggccgtcacgggcgtcagcgggtccggcaagtcc
tcgctcgtcaacgacatcctctaccgcgtgctcgccaacgagctcaacggcgcccgcaag
gtcccgggcaagcactcccgcgtcacggggctcgagaacctcgacaaggtcgtgcacgtc
gaccagaaccccatcggccgcaccccgcgctcgaacccggccacctacacgggcgtgttc
gaccggatccgcaacctgttcgccgagacgaccgaggccaaggcccgcgggtacctcccc
ggccgcttcagcttcaacgtcaagggcgggcgctgcgaggcgtgctcgggcgacggcacg
atcaagatcgagatgaacttcctgcccgacgtgtacgtggcgtgcgaggtatgcggggga
gcgcggtacaaccgcgacaccctcagcgtccactacaagggcaagagcatcgccgaggtg
ctcgacatgtccatcagcgaggccgcggagttcttcgagccgatccaggccatccaccgc
ttcatgaagacgctggtcgacgtgggcctcggctacgtgcggctcggccagagcgccacg
acgctctccggcggcgaggcgcagcgcgtcaagctgtccaccgagctgcagcgccggtcg
aacggccggagcatctacgtgctcgacgaaccgaccaccgggctccacttcgaggacgtg
cggaagctgctcctggtgctgaacgggctggtcgacaagggcaacaccgtcatcgtcatc
gagcacaacctcgacgtcatcaagtccgccgactggctcatcgacatgggcccggagggc
ggcgcgggcggcggcacggtgctcgccaccggcacgcccgagcacctggccaccgtgccg
gagagctacacgggcggcttcctcaaggaggtcctcgacgccgaggccgaggcctccgcg
gtcgcgtcccagcgcgcgcgcgaggagcgcgcggccggctga
DBGET
integrated database retrieval system
