Clavibacter michiganensis subsp. michiganensis: CMM_1755
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Entry
CMM_1755 CDS
T00529
Symbol
polA1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03030
DNA replication
cmi03410
Base excision repair
cmi03420
Nucleotide excision repair
cmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CMM_1755 (polA1)
03410 Base excision repair
CMM_1755 (polA1)
03420 Nucleotide excision repair
CMM_1755 (polA1)
03440 Homologous recombination
CMM_1755 (polA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmi03032
]
CMM_1755 (polA1)
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_1755 (polA1)
Enzymes [BR:
cmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CMM_1755 (polA1)
DNA replication proteins [BR:
cmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CMM_1755 (polA1)
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CMM_1755 (polA1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CMM_1755 (polA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
ThiG
Motif
Other DBs
NCBI-ProteinID:
CAN01811
UniProt:
A5CRU8
LinkDB
All DBs
Position
complement(1986210..1988894)
Genome browser
AA seq
894 aa
AA seq
DB search
MPNTEKPTLLVIDGHSLAFRAFYALPAESFQNREGQHTNAVHGFIAMLINLLQKEKPTHV
GVAFDISRFSFRTREYPEYKGTRGETPVEFTGQVPLLERALKTMNIPTLTKEDHEADDIL
ATLATQGREQGFRVLVVSGDRDAIQLVNDDVTLLYPSTQGVSQLTRYDAEKVFEKYGVQP
EMYPDIAALVGETSDNLIGVDKVGPKTAVKWLNQYGSLDAVLEHRDEISGKVGDNLRAQY
ENVIRNRRLNRLLTDVELPLGPKDLERKPIDEPALREVFQVLEFKQLLDRVLKLEGSGAS
ASSEGTPVGAVEQEPSTAPAAPRPQQLLDEELAKWIERQGAASPHGLGLTVETQDGRPVG
FGLASATEAVTLPWQEGRADYAPFERWLASDAPKIMSDAKLQVKAMRRAGLEVQGLAFDV
LVAGWLLRPGFTDKTLAALVSRYLMEDLPEPDANQLVPETEALTAPVEAWYTLRVEHALR
EVLDERTLGVMVDIEMPTLLVLVEMELRGVATDRAGLAELSAQLQERITDLAQRAFAEIG
KEINLGSPKQLQEVLFDQLGMPKTRANKTGFSTDAGALADLQASNPHPFLDLLLEHRDAS
KLRQIIQTLERGIGDDERIHTTYVQTGTTTGRISSNDPNLQNIPVRTEEGRRIRSAIRVG
EGYETLLTADYSQIEMRIMAHLSGDAGLIEAFAAGEDLHRFVGSRIFGVEPADVSAEMRT
KVKAMSYGLAYGLSAFGLSKQLRIPSSEAKQLMTDYFARFGAVRDYLRQVVEEARAAGYT
ETIFGRRRPFPDLNSPNRVLRDNAERAALNAPIQGSAADIMKIAMIRIEADMRERDMASR
MLLQVHDELILEVAAGEWDALEAIVTDRMAHAADLRVPLEVQVGRGDSWAAAAH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacacggaaaagcctaccctcctcgtcatcgacggccattccctggcgttccgg
gccttctacgccctgcctgcggagagcttccagaaccgcgaggggcagcacacgaacgcc
gtgcacggcttcatcgcgatgctcatcaacctcctgcagaaggagaagcccacgcacgtg
ggcgtcgcgttcgacatctcgcgcttctcgttccgcacgcgcgagtacccggagtacaag
ggcacgcgcggcgagacgcccgtggagttcaccgggcaggtgccgctgctcgagcgggcg
ctgaagaccatgaacatccccaccctcaccaaggaggaccacgaggcggacgacatcctc
gcgaccctcgccacgcagggtcgcgagcagggcttccgcgtgctcgtcgtctcgggcgac
cgcgacgccatccagctcgtcaacgacgacgtcacgctgctctacccgtccacccagggc
gtctcccagctcacgcgctacgacgcggagaaggtgttcgagaagtacggcgtgcagccc
gagatgtacccggacatcgcggcgctcgtgggggagacgagcgacaacctcatcggcgtc
gacaaggtcggcccgaagaccgcggtcaagtggctcaaccagtacggctccctcgacgcg
gtcctcgagcaccgggacgagatctcgggcaaggtcggcgacaacctccgcgcccagtac
gagaacgtcatccgcaaccgccgcctcaaccggctgctcaccgacgtcgagctgccgctc
gggcccaaggacctcgagcggaagcccatcgacgagcccgcgctccgcgaggtgttccag
gtgctggagttcaagcagctgctggatcgggtgctgaagctcgagggatccggcgcctcc
gcgtcgagcgagggcacgcccgtcggcgcggtcgagcaggagccctccacggctcccgcc
gccccgcggccgcagcagctgctcgacgaggagctcgcgaagtggatcgagaggcagggc
gccgcgtcgccccatggcctcggtctcaccgtcgagacgcaggacgggaggcccgtgggc
ttcggcctcgcgagcgcgaccgaggccgtgaccctgccgtggcaggagggccgcgccgac
tacgcgccgttcgagcggtggctggcgagcgacgcgccgaagatcatgtcggacgccaag
ctgcaggtgaaggccatgcgccgcgccggcctcgaggtccaggggctcgcgttcgacgtg
ctcgtcgcgggctggctgcttcgtcccgggttcaccgacaagacgctcgccgcgctcgtg
agccgctacctcatggaggacctgcccgagcccgacgccaaccagctcgtgcccgagacc
gaggcgctcacggcgccggtcgaggcctggtacacgctccgggtcgagcacgcgctgcgc
gaggtgctcgacgagcgcacgctcggcgtcatggtcgacatcgagatgccgacgctcctc
gtgctggtcgagatggagctccgcggcgtcgcgaccgaccgcgccggcctcgccgagctg
tcggcgcagctgcaggagcgcatcaccgacctcgcgcagcgcgcgttcgcggagatcggc
aaggagatcaacctcggctcgccgaagcagctgcaggaggtcctcttcgaccagctcggc
atgccgaagacgcgcgccaacaagaccggcttctcgaccgacgccggcgcgctggccgac
ctgcaggcgtcgaacccgcacccgttcctcgacctgctcctcgagcaccgcgacgcgagc
aagctgcggcagatcatccagacgctcgagcgcggcatcggcgacgacgagcggatccac
accacctacgtgcagaccggcacgacgaccggccgcatctcctcgaacgacccgaacctg
cagaacatcccggtgcgcacggaggagggccgccgcatccgcagcgccatccgcgtcggc
gagggctacgagaccctgctcaccgccgactactcgcagatcgagatgcggatcatggcg
cacctctccggcgacgcgggcctcatcgaggccttcgcggcgggggaggacctgcaccgc
ttcgtgggatcccgcatcttcggggtggagccggcagacgtcagcgccgagatgcgcacc
aaggtcaaggccatgagctacggcctcgcctacgggttgagcgcgttcgggctgtccaag
cagctgcgcatcccgtcgtccgaggcgaagcagctcatgaccgactacttcgcgcgcttc
ggggccgtgcgcgactacctccgccaggtcgtggaggaggcgcgcgccgccgggtacacg
gagacgatcttcggccgacgccgcccgttccccgacctcaacagcccgaaccgcgtcctc
cgggacaacgccgagcgggctgcgctcaacgcgcccatccaggggtcggcggccgacatc
atgaagatcgcgatgatccgcatcgaggccgacatgcgcgagcgcgacatggcgtcgcgc
atgctgctgcaggtgcacgacgagctcatcctcgaggtcgcagcgggggagtgggacgcg
ctcgaggccatcgtcaccgaccgcatggcgcacgcggcggacctccgggtaccgctcgag
gtgcaggtgggccgcggcgactcgtgggccgctgccgcgcactga
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