Clavibacter michiganensis subsp. michiganensis: CMM_1861
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Entry
CMM_1861 CDS
T00529
Symbol
murD
Name
(GenBank) putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00470
D-Amino acid metabolism
cmi00550
Peptidoglycan biosynthesis
cmi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CMM_1861 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMM_1861 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmi01011
]
CMM_1861 (murD)
Enzymes [BR:
cmi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CMM_1861 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cmi01011
]
Precursor biosynthesis
Amino acid ligase
CMM_1861 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
TrkA_N
F420_oxidored
2-Hacid_dh_C
YuA_Gp49
NAD_binding_7
Pyr_redox_2
Pyr_redox
AlaDh_PNT_C
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
CAN01917
UniProt:
A5CS53
LinkDB
All DBs
Position
complement(2102529..2104073)
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AA seq
514 aa
AA seq
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MTDGTSDDGTALARPGSLHSWHDDWTGLRVAVLGLGRTGFSVADTLVELGADVLVVAADA
SPERLALLDVIGGRLVRPTEEEPVPSELVAFTPELVVVSPGYAPTHPLPAWAAEAGIPLW
GDIELAWRVRDKTGTPAEWITITGTNGKTTTTQLTAALLQEGGVRAVPCGNIGLPVLDVV
RHPDGFDVLVVELSSHQLHYMREVRPYSSAFLNLADDHLEWHGSRAAYAAAKGRVYADTR
VACVYNRADRATEDALREADVQDGARAIGFGLDAPGPSDLGIVDGILCDRAFLEERFTSA
LELTTLDELRAVGLAAPHIVQNILAAAALARSYGVEPGVVRQALLRFELDSHRIERIGER
DGVAFVDDSKATNPHAASASLAAFPSVVWVVGGLLKGVELDDLIRAHAARLRAAVVIGVE
RVEVLAAFARHAPDVTVLEVAESDTEQVMRSAVRLAAGVAREGDTVLLAPAAASMDQFTD
YADRGRRFRTAVDHHLGGAADDTAPENDADPSRG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgacagacggcacctccgacgacggcaccgcgctcgcgcgaccgggctccctgcacagc
tggcacgacgactggaccggcctccgcgtcgccgtcctcggcctcgggcgcacaggcttc
tcggtggccgacacgctggtcgagctcggcgccgatgtgctcgtggtcgccgccgacgcc
tcgcccgagcggctggcgctgctcgacgtgatcggcgggcgcctcgtgcggccgaccgag
gaggagcccgtcccctccgagctcgtggccttcacgcccgagctcgtggtcgtgtcgccc
ggctacgcgccgacgcaccccttgcccgcgtgggcggctgaggcggggatcccgctgtgg
ggcgacatcgagctcgcctggcgcgtgcgcgacaagacggggacgccggccgagtggatc
accatcaccggcacaaacggcaagaccaccaccacgcagctcacggccgcgctcctccag
gagggcggggtgcgcgccgtgccgtgcggcaacatcggcctgcccgtgctcgacgtcgtc
cgccacccggacggcttcgacgtgctcgtggtcgagctgtcgagccaccagctgcactac
atgcgcgaggtgcggccctattcgagcgcgttcctcaacctcgcggacgaccacctcgag
tggcacggctcgcgtgcggcgtacgccgccgcgaaggggcgggtctacgcggacacgcgc
gtcgcctgcgtctacaaccgcgccgaccgcgccaccgaggacgcgctccgcgaggccgac
gtccaggacggcgctcgtgccatcggcttcggcctggacgcgccgggtcccagcgacctc
gggatcgtcgacgggatcctctgcgaccgcgccttcctcgaggagcggttcacctccgcg
ctcgagctgacgacgctcgacgagctgcgcgccgtgggactcgcggcgccgcacatcgtg
cagaacatcctggccgcggcggccctcgcccggtcctacggcgtggagcccggcgtcgtg
cggcaggcgctgctgcgcttcgagctggacagccaccgcatcgagcggatcggggagcgc
gacggggtcgcgttcgtcgacgactcgaaggccaccaacccgcacgcggcgtccgcgtcg
ctcgcggcgttcccctccgtggtgtgggtcgtcggcggcctcctcaagggcgtcgagctc
gacgacctgatccgcgcccacgcggcacgcctgcgcgcggcggtcgtcatcggcgtcgag
cgcgtcgaggtcctcgcggcattcgcgcgacacgcgcccgacgtcaccgtcctcgaggtg
gccgagagcgacactgaacaggtcatgcggtccgccgtgcggctcgcggcgggcgtggcc
cgggagggcgacaccgtcctcctggccccggcggcggcatccatggaccaattcaccgac
tacgccgaccgcggacgccgattccggaccgcggtcgaccaccacctgggaggtgcggcg
gatgacactgcccccgagaacgacgcggacccctcgcgcggctga
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