Clavibacter michiganensis subsp. michiganensis: CMM_1880
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Entry
CMM_1880 CDS
T00529
Symbol
pycA
Name
(GenBank) putative pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00020
Citrate cycle (TCA cycle)
cmi00620
Pyruvate metabolism
cmi00720
Other carbon fixation pathways
cmi01100
Metabolic pathways
cmi01120
Microbial metabolism in diverse environments
cmi01200
Carbon metabolism
cmi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CMM_1880 (pycA)
00620 Pyruvate metabolism
CMM_1880 (pycA)
09102 Energy metabolism
00720 Other carbon fixation pathways
CMM_1880 (pycA)
Enzymes [BR:
cmi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
CMM_1880 (pycA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
Biotin_lipoyl_2
HlyD_3
Dala_Dala_lig_C
ATP-grasp
HlyD_D23
GCV_H
RnfC_N
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
CAN01936
UniProt:
A5CS72
LinkDB
All DBs
Position
complement(2125267..2128668)
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AA seq
1133 aa
AA seq
DB search
MFEKILVANRGEIAIRAFRAAVELGARTVAVYPHEDRHSLHRLKADEAYLIGEEGHPVRA
YLDVDEIIRVALQCGADAIYPGYGFLSENPDLARAAADNGIVFIGPSAGVLEMAGNKVTA
KEHATAAGVPVLASTPPSTDVELLLEQAEGIGFPIFAKAVAGGGGRGMRRVERAEDLEDA
LRAAMREADSAFGDPTMFLEQAVLRPRHIEVQILADATGETVHLFERDCSVQRRHQKVVE
IAPAPNLDPVIRDAMHAHAIAFARSIGYVNAGTVEFLLDTDGPRAGQHVFIEMNPRIQVE
HTVTEEVTDVDLVQSQMRIAAGETLAELGLGQDAIVLRGAALQCRITTEDPAQGFRPDTG
KITTYRSPGGGGIRIDGGTVATGAQISPHFDSMLAKLTCRGRDFPAAVTRAKRALAEFRI
RGVSTNIPFLQGVLDDPDFQAGDISTSFIDERPGLVRSNVSKDRGTKILNWLADVTVNQP
NGPRTAVVRPVDKLPDVDLRQPAPAGSRQRLLELGPRGFADALRAQTALAVTETTFRDAH
QSLLATRVRTRDLVAVAPYVARTTPELLSVEAWGGATYDVALRFLGEDPWERLASLREAL
PNVAIQMLLRGANTVGYTPYPTEVTDAFVQEAAATGVDVFRIFDALNDVERMRPAIDSVL
ATGTTVAEVALCYTGNLLDPAEDLYTLDYYLGLAERSVAAGAHVLAIKDMAGLLRPAAAE
RLVTALRREFDLPVHVHTHDTAGGQLATLLAASRAGADAVDVASAPMSGTTSQPSASALV
AALADTERDTGLSLDAVSDLEPYWEAVRRLYRPFESGLAGPTGRVYRHEIPGGQLSNLRQ
QAIALGLADDFELIEDMYAAADRILGRIPKVTPSSKVVGDLALQLAAAKADPADFERNPQ
DYDIPDSVVGFMAGELGDLPGGWPEPFRTRVLQGRDVRIGVTPVSAEDRAALRVPGVERR
RTLNHLLFPQPTEQFETIRELFGDLSVLDTDDYLHGLRPGQEHAVRISRGVEVLIGLEAV
GDADESGMRTVMVVMNGQLRPVFVRDRGIAVTTTAAERGDPAKPGHVSAPFSGVVTLKVE
EGQVVAAGQPVASIEAMKMEAAITSPVAGRVARLAVPTTQQVDAGDLLVVVEP
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaagatcctcgtcgccaaccgcggggagatcgcgatccgcgcgttccgggcc
gccgtcgagctgggcgcccgcacggtcgccgtctacccgcacgaggaccggcactcgctg
caccggctgaaggcggacgaggcgtacctcatcggcgaggagggccaccccgtccgggcg
tacctcgacgtcgacgagatcatccgcgtggcgctccagtgcggcgccgacgccatctac
ccgggctacgggttcctctccgagaaccccgacctcgcgcgcgcggccgccgacaacggc
atcgtcttcatcggcccctccgccggggtgctcgagatggctggcaacaaggtcacggcc
aaggagcacgcgaccgcggccggcgtgccggtcctcgcgtcgacgccgccgtcgaccgac
gtggagctgctgctcgagcaggcggaggggatcggcttcccgatcttcgcgaaggccgtc
gcgggcggcggcggccgcggcatgcggcgcgtcgagcgcgcggaggacctcgaggacgcg
ctccgggccgccatgcgggaggcggacagcgccttcggcgacccgacgatgttcctcgag
caggcggtgctccggccgcggcacatcgaggtgcagatcctcgccgacgccacgggggag
accgtgcacctcttcgagcgcgactgctcggtgcagcgccggcaccagaaggtcgtggag
atcgccccggcgccgaacctcgacccggtgatccgcgacgccatgcacgcccacgcgatc
gcgttcgcccggagcatcggctacgtcaacgccggcacggtcgagttcctgctcgacacc
gacgggccgcgcgccgggcagcacgtcttcatcgagatgaacccgcgcatccaggtcgag
cacaccgtgaccgaggaggtgacggacgtcgacctcgtgcagtcgcagatgcgcatcgcg
gcgggggagaccctcgccgagctcggcctcggccaggacgcgatcgtgctgcgcggcgcg
gcgctccagtgccgcatcacgaccgaggacccggcgcagggcttccgcccggacaccggc
aagatcacgacgtaccgctcgccgggcggcggcgggatccgcatcgacggcggcacggtc
gcgaccggcgcgcagatcagcccgcacttcgactcgatgctcgcgaagctcacctgccgc
gggcgcgacttcccggccgccgtcacgcgggccaagcgcgccctggccgagttccggatc
cgcggcgtctccacgaacatccccttcctccagggtgtgctcgacgaccccgacttccag
gcgggcgacatcagcacctccttcatcgacgagcggccggggctcgtgcgcagcaacgtg
tcgaaggaccgcgggacgaagatcctcaactggctcgccgacgtcaccgtcaaccagccg
aacgggccgcgcaccgcggtcgtgcggcccgtcgacaagctgcccgacgtcgacctccgg
cagccggcgcccgcgggatcccgccagcggctcctcgagctcggaccccgcggcttcgcc
gacgccctccgtgcgcaaaccgccctcgcggtcacggagacgacgttccgtgacgcgcac
caatcgctgctcgcgacgcgcgtgcgcacccgcgacctcgtggccgtcgccccgtacgtc
gcgcgcacgacgcccgagctcctctccgtcgaggcctggggcggcgccacctacgacgtg
gcgctgcgcttcctcggcgaggatccgtgggagcggctcgcgtcgctgcgcgaggcgctg
ccgaacgtcgcgatccagatgctgctgcgcggcgccaacacggtgggctacacgccgtac
ccgacggaggtcaccgacgcgttcgtgcaggaggccgccgcgaccggcgtcgacgtgttc
cgcatcttcgacgcgctcaacgacgtcgagcgcatgcgccccgcgatcgactccgtgctc
gccaccggcaccacggtggccgaggtcgccctctgctacacgggcaacctgctggatccc
gccgaggacctctacacgctcgactactacctcggcttggcggagcggagcgtcgccgcg
ggcgcgcacgtcctcgcgatcaaggacatggccgggctcctccgccccgcggccgccgag
cgcctcgtcaccgcgctccgccgcgagttcgacctccccgtccacgtgcacacccacgac
acggcgggcggccagctcgcgaccctgctcgcggccagccgcgccggggccgacgcggtc
gacgtcgcgagcgcgcccatgtcgggcaccacgagccagccgtcggcgtccgcgctcgtc
gccgccctcgcggacaccgagcgcgacacgggcctctcgctcgacgcggtcagcgacctc
gagccgtactgggaggcggtccgccgcctgtaccggccgttcgagtccgggctcgcgggc
ccgaccgggcgcgtgtaccggcacgagatccccggggggcagctctcgaacctccgccag
caggcgatcgcgctcggcctcgccgacgacttcgagctcatcgaggacatgtacgccgcc
gccgaccggatcctcggccgcatccccaaggtcacgccgtcgtccaaggtggtcggcgac
ctcgccctccagctggccgccgcgaaggccgacccggccgacttcgagcgcaacccgcag
gactacgacatccccgactcggtggtcggcttcatggcgggcgagctgggcgacctgccc
ggcggctggccggagccgttccgcacccgggtcctccagggacgcgacgtgcgcatcggc
gtcacgcccgtctccgccgaggaccgcgccgcgctgcgcgtgcccggcgtcgagcggcgg
cgcacgctcaaccacctcctgttcccgcagccgacggagcagttcgagaccatccgcgag
ctcttcggcgacctctccgtgctcgacaccgacgactacctgcacggcctccgcccgggg
caggagcacgcggtgcggatcagccggggcgtcgaggtcctcatcggcctcgaggccgtg
ggtgacgcggacgagtcggggatgcggaccgtcatggtcgtcatgaacggacagctccgc
cccgtcttcgtccgagaccgcggcatcgccgtgaccacgaccgccgccgaacgcggtgac
cccgcgaagcccgggcacgtgtcggcaccgttctccggcgtcgtcacgctgaaggtggag
gagggccaggtcgtcgccgccggccagcccgtcgcgtccatcgaggcgatgaagatggag
gcggccatcacgtcgcccgtcgcgggacgcgtagcgcgcctcgcggtgccgaccacgcag
caggtcgacgcgggcgacctgctcgtcgtcgtcgagccctag
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