Clavibacter michiganensis subsp. michiganensis: CMM_1986
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Entry
CMM_1986 CDS
T00529
Name
(GenBank) unnamed protein product; putative rRNA methyltransferase (ZP_00294025.1| COG1189: Predicted rRNA methylase [Thermobifida fusca]; AAN24854.1| hemolysin-like protein with S4 domain found in bacteria and plants [Bifidobacterium longum NCC2705]). pfam01479, S4, S4 domain. Interpro: S4 domain. Interpro: Ribosomal RNA methyltransferase RrmJ/FtsJ.; Function unclear
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmi03009
]
CMM_1986
Enzymes [BR:
cmi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
CMM_1986
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
CMM_1986
Ribosome biogenesis [BR:
cmi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CMM_1986
23S rRNA modification factors
CMM_1986
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
S4_2
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
CAN02042
UniProt:
A5CSH8
LinkDB
All DBs
Position
complement(2243608..2244486)
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AA seq
292 aa
AA seq
DB search
MADAGDGSAPASAADPVPGEALGGDLRLDAALPALGLARSRTHAARLIADGLVTVDGRGV
VKASFRVMPGSVVEVAGSDAYVSRGAHKLIGALDAFPGVAVAGRLALDVGASTGGFTQVL
LERGARRVVALDVGHGQLDPLIREDPRVDVVEGFNVRDLTPESLAGVTPADLAGERPGLV
VGDLSFISLGLVLPAIACTAADGADVVLLIKPQFEVGRTGIREGIVHDPGLRDDAVMRVL
WAAWDLGLGTAGLVSSPIVGGAGNHEYLAWFSGRAGSNPTQWRSTSNEITGA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacgccggcgacggttccgcgcccgcgtccgctgccgacccggtccccggcgag
gcgctcggcggggacctgcggctcgacgccgccctgccggctctcggcctcgcgcgctcc
cgcacgcacgccgcccggctcatcgccgacgggctcgtcacggtcgacggacgaggcgtc
gtcaaggcgtcgttccgggtgatgcccggatccgtcgtcgaggtcgcgggctccgacgcc
tacgtgagccgaggcgcccacaagctcatcggcgcgctcgacgccttccccggggtcgcg
gtcgcggggcggctggcgctcgacgtcggcgcgtccaccggcgggttcacgcaggtgctg
ctcgagcggggtgcgcggcgcgtcgtggcgctcgacgtggggcacgggcagctggacccg
ctcatccgcgaggatccgcgcgtcgacgtcgtcgaggggttcaacgtgcgcgacctgacg
cccgagtcgctcgccggggtgacgccggcggacctcgcgggggagcggcccgggctcgtc
gtcggcgacctgtccttcatctcgctcgggctcgtgctgcctgccatcgcgtgcaccgcc
gcggacggcgccgacgtcgtgctgctgatcaagccgcagttcgaggtcgggcgcacgggg
atccgcgagggcatcgtgcacgacccggggctccgcgacgacgccgtcatgcgcgtgctc
tgggccgcgtgggacctcggcctcggcacggccggcctcgtctcctccccgatcgtcggc
ggggccgggaaccacgagtacctcgcctggttcagcggtcgcgcggggagcaatccgaca
caatggagatcgacgtcgaacgagatcacaggagcgtga
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