KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_2022
Entry
CMM_2022          CDS       T00529                                 
Symbol
miaA
Name
(GenBank) High confidence in function and specificity; tRNA delta(2)-isopentenylpyrophosphate transferase (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (ZP_00293566.1| COG0324: tRNA delta(2)-isopentenylpyrophosphate transferase [Thermobifida fusca]; ZP_00226411.1| COG0324: tRNA delta(2)-isopentenylpyrophosphate transferase [Kineococcus radiotolerans SRS30216]). Catalyzes the first step in the biosynthesis of 2-methylthio-N6-(delta(2)-isopentenyl)-adenosine (MS[2]I[6]A]) adjacent to the anticodon of several tRNA species (By similarity). pfam01715, IPPT, IPP transferase. This is a family of IPP transferases EC:2.5.1.8 also known as tRNA delta(2)-isopentenylpyrophosphate transferase. InterPro: tRNA isopentenyltransferase TIGRFam: miaA: tRNA delta(2)-isopentenylpyrophos
  KO
K00791  tRNA dimethylallyltransferase [EC:2.5.1.75]
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Pathway
cmi01100  Metabolic pathways
cmi01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:cmi01006]
    CMM_2022 (miaA)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:cmi03016]
    CMM_2022 (miaA)
Enzymes [BR:cmi01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.75  tRNA dimethylallyltransferase
     CMM_2022 (miaA)
Prenyltransferases [BR:cmi01006]
 Compound prenylation
  tRNA dimethylallyltransferase
   CMM_2022 (miaA)
Transfer RNA biogenesis [BR:cmi03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    CMM_2022 (miaA)
 Prokaryotic type
    CMM_2022 (miaA)
SSDB
Motif
Pfam: IPPT AAA_25 AAA_16 IPT PhoH ResIII
Other DBs
NCBI-ProteinID: CAN02085
UniProt: A5CSL4
LinkDB
Position
complement(2283439..2284362)
AA seq 307 aa
MIPIVAVVGATGTGKSGLSLDIADRLRAQGRVAEIVNADAMQLYRGMDIGTAKLPEAARR
DVPHHMLDVLDVTAEATVAGYQGEARRVITGILGRGAVPILVGGSGLYVSSVLFDYEFPG
TDPEIRQRLERELAETGPGMLHRRLRELDPAAAQRIGAHNGRRLVRALEVVEITGPQPER
ASAEPRPWHPARILALTLPREELVPRLDARVSGMWADGLVDEVAGLLPAGLADGVTASRA
IGYAQAARQLAGELTEEEAMEETRALTRRYARRQVSWFGRYADAVRLDARDERLLEHALD
ALPAARP
NT seq 924 nt   +upstreamnt  +downstreamnt
gtgatcccgatcgtcgcggtcgtcggcgccaccggcaccggcaagtccgggctgtccctc
gacatcgcggatcggctgcgggcgcagggtcgcgtcgcggagatcgtcaacgcggacgcc
atgcagctgtaccgcggcatggacatcggcacggccaagctgccggaggccgcgcgtcgt
gatgtgccgcaccacatgctcgacgtcctcgacgttaccgccgaggcgaccgtggccggg
taccagggggaggcgcgccgggtgatcaccggcatcctcggacgcggtgcggtcccgatc
ctcgtcgggggatccgggctctacgtctcgtcggtcctgttcgactacgagttccccggc
acggaccccgagatccgacagcgcctggagcgggagctcgcggagaccgggccgggcatg
ctgcaccggcgcctccgagagctcgacccggccgcagcccagcggatcggcgcgcacaac
gggcgccgcctcgtgcgggcgctggaggtcgtggagatcacgggtccgcagccggagcgc
gcgtccgccgagccgcggccgtggcacccggcgcggatcctggcgctcacgctgccgcgc
gaggagctcgtgccgcgcctcgacgcccgcgtgtccggcatgtgggccgacggactcgtc
gacgaggtcgccgggctgcttcccgcggggctcgcggacggcgtcaccgcgtcccgcgcc
atcggctacgcgcaggcggctcggcagctcgcgggagagctcaccgaggaggaggcgatg
gaggagacgcgtgcgctcacccgtcgctacgcgcggcgacaggtgtcgtggttcggtcgc
tacgccgacgcggtgcggctcgacgcgcgcgacgaacggctcctcgagcacgcgctcgac
gccctcccggcggcgcgcccgtag

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