Clavibacter michiganensis subsp. michiganensis: CMM_2072
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Entry
CMM_2072 CDS
T00529
Name
(GenBank) putative DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CMM_2072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_2072
Enzymes [BR:
cmi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CMM_2072
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CMM_2072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
CAN02135
UniProt:
A5CSR4
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All DBs
Position
2336075..2337010
Genome browser
AA seq
311 aa
AA seq
DB search
MDSPSAVAHVDRTVLEVPGPFDGGGVIRFLSWHAVTGAEEGDATSFTQSARLAHGAGTVT
VRLLEAEPGDVGGARVEVTTRVEHAADAAELLAGTRRLLGLDVDAARIDADLARDPALAA
VVRATPGLRIPGTLDPRSTLFRTIVGQQISVASARATHGRMTADLGEDLPASVAHGSVTR
LPPTAARIARDGGELLRGPARRTATLIRIAEALETGELVIEPGVPRAELRAALVAFHGVG
PWTADYVAMRALGEPDILLSGDLIVRRGGAALGLPDEARALDARAAAWSPWRSYATLHLW
RVMTDGMPAAG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggactcccccagtgccgtggcgcacgtcgaccgcacggtgctcgaggtccccggtccc
ttcgacggcggcggcgtcatccgcttcctctcctggcacgccgtcacgggcgcggaggag
ggcgacgccacgtcgttcacgcagtcggcgcggctcgcgcacggcgcggggacggtgacc
gtgcgactgctcgaggccgagcccggcgacgtgggaggcgcgcgcgtcgaggtcaccacg
cgcgtcgagcacgccgccgacgccgccgagctcctcgccggcacgcgccgcctgctcggc
ctcgacgtcgacgccgcgcgcatcgacgccgacctcgcccgcgaccccgcgctcgccgcc
gtggtgcgcgcgacgcccggcctgcggatccccggcacgctggatccgcgcagcacgctc
ttccgcaccatcgtcggccagcagatctccgtcgcctccgcccgcgccacgcacggccgc
atgaccgccgacctcggcgaggacctgcccgcgtcggtggcgcacggatccgtgacccgc
ctgccgccgaccgccgcgcgcatcgcccgcgacggcggcgaactcctccgcgggcccgcc
cggcgcacggccacgctgatccgcatcgccgaggccctcgagaccggcgagctcgtgatc
gagccaggcgtgccgcgcgcggagctccgcgccgcgctggtcgcgttccacggcgtcggc
ccctggaccgccgactacgtcgcgatgcgcgcgctcggcgagccggacatcctgctgtcc
ggcgacctcatcgtccgccgcggcggcgccgcgctcggcctccccgacgaggcccgcgct
ctggatgcgcgcgcggccgcgtggtcgccgtggcgctcctacgcgacgctgcacctctgg
cgcgtcatgaccgacgggatgccggccgcgggctga
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