Clavibacter michiganensis subsp. michiganensis: CMM_2169
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Entry
CMM_2169 CDS
T00529
Name
(GenBank) putative RTX toxin
KO
K20276
large repetitive protein
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMM_2169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
fn3
Motif
Other DBs
NCBI-ProteinID:
CAN02239
UniProt:
A5CT14
LinkDB
All DBs
Position
complement(2453881..2459895)
Genome browser
AA seq
2004 aa
AA seq
DB search
MIREWIRRHRQAATTVTGGAVVLALLTGFALVSDGYQAQRVDLDDGSVWVVNSAQQAIGR
ANTAVLELDSVVDSRSEDIDVLQAGSTVLLADRGSSRLDVVDDATSEVVDTAPLPAGAEV
MLAGPRAAILVPATGQLWLVPVAGLSAFDAASAPTLILGADAVASMGDDGTLLVYSAATG
TLSRIRAATEDTVRETVDVGPVGAPVDAAADAPADPAAALAGETVQAGDPGRPAGQRLAL
TSVDGRWALYDADARALLVDGRTVDLAGSVAADARVALQRASSDGGGVLVAHSGGLVEVP
VAGGDPVVVTGDVRGDPARPVRVSGCEYAGWADGSGWQRCLAPAALAGGGDGDRDARRTT
AGATGDLGSMPQQAALRFLVDGTRVVLNDTRGGTAWAVQRDAGLIDNWADLIDRDRSDTV
VEQNTADTPPETDRVQQPPVAVDDDLGARPGRTTALPVLLNDHDPNGDVLVIDSVTPVDA
EVGVVDIVDDGQGLQLALAAGASGTVRFSYVVSDGRGGTATADVRVAVRGADENAPPEQA
RPATGTVAEGDRLQTDVLGGWYDPDGDPMYLTRASVPAPDAVSWKPEGRVVYTDAGAGGD
TRTVALQVSDGREEGSGELVVTVRRAGDVPLVAEGFVVQAAIGREITVEPLTHARGGSGA
IRLAAVPARAGVQITPDLEAGTFRLEGGQAGTHLLEYTVTDGRTTATGVVRVEVRGAPAS
DGRPVTVPHTVFVRALQAQDVDVLQTDFDPAGGVLVITDAVSPGDAVGVRAEVVGQRLVR
ISLTRPLDGPVDVEYRVSNGVAEATGVITVIEVPEPAVRQPPVATDDRVAVRVGDAVDIP
VLANDQQPDGDRLRLDPVLVDPLPEGSGLLFASEDRLRYLAPDRTGDYTAVYRAVAPDGR
WATATLTVSVREADVATNAEPVPRPLTARVLAGETVRIPVPLTGIDPDGDSVRLLGQDTG
PEKGQVVEVGPDWIDYQAGDYSTGTDAFAYAVVDGLGARATGTIRVGISPRVEGARNPVA
TADTVTVRPGRVLRVQVLANDTDPDGGALSLVSVQPQEEGLVAGLDGDTVRVVAPEQAGR
YGFVYGVRNARGGSDEAFLTVIVDPAAPPTRPIARDTVLQLSDVLDRSSVDVDVMRNVFS
AEGDASSLVLAVGAGYEDVALVTDDGRIRVEVGDERRIVPFTVAQPDDPTISATAFVWVP
GFEDTLPQLRVGEPRPTVPSGERLVVELDEQVVAAGGRAVRIADPNSLSATHAAGPVELV
DEDTIAYRSEPGYFGPAAISFTVTDGSGAGGRTAALVLPITVTPTENQPPVFTGAVIDLE
PGQSKDVDLGRLTTYPYQDDRGQLAFALEGSVAAGFRASVDGGTLRISADEGVATGQAAS
FPVSVRDATQTGRAGRVDLRVVPSTRPLAQPATDEGTVTRGSSTSVDVLANDQAGNPFPG
TPLTVASIRGADGASLPAGVTVTPSADRATLAVSASADAVPGDVRVQYEVRDATGDAGRA
AFGTVVIHVQDRPGPVSALRASGFADRSLTVAFEPGAFNGSAITGYQVRVLRGGTATATV
TCPSTTCTVPTPGNGPGSSVQVEVSAVNGVGTSDPVSISGLWSDVLPAAPAGLAVEPLVD
GLRLSWQPSAVPSSSSPVTQYVVGVGGLTRQVASDATSVEVRDPSLVAEVPVAVSVAARN
SAQVQDGTAWLAATATGTPRGAPTATGAPTAVADAADETRVTVSWPAFQGQGVDGIRYLV
AAYAPGSAPGCSVPTEGVSPWSAQHGPAVEVGGATSHVFTGLATDQPVAFAVLAANSQGC
TVVEAGQLTPRTAPSTPVVRVDLPSPDRPGDGVFRAVLADARYRSGSASASAQLLYRVDG
QGDGVPIGVGQALTLPRTGVGASIQVRVVEDSGDGRPRSSGWSDPVSAGTAVDARAGDVR
SATDDAGVTTFSWTSMPPAVAGFGRVGDGGGYARSEWRCGGQGAWADASSGAAGSCAVPA
GGERILEVRVTANSGNLYTYAHRG
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgagtggatccgccgccaccgccaggccgcgacgaccgtcaccggcggggcc
gtcgtgctcgccctcctcacgggcttcgcgctcgtctccgacggataccaggcgcagcgc
gtcgacctcgacgacggatccgtgtgggtcgtcaactccgcgcagcaggcgatcggccgc
gccaacacggccgtgctcgagctcgacagcgtcgtcgactcccgcagcgaggacatcgac
gtgctgcaggccggatccaccgtgctgctcgccgaccgcggcagctcgcggctcgacgtg
gtcgacgacgcgacgagcgaggtggtcgacaccgcaccgctgcccgcgggcgccgaggtc
atgctcgcgggaccccgcgccgcgatcctcgtgccggcgacgggccagctgtggctcgtg
ccggtcgcgggcctctccgcgttcgacgccgcgagcgcgcccacgctcatcctcggggcc
gacgccgtcgcgtccatgggcgacgacggcacgctgctcgtgtactcggccgcgacgggg
acgctgtcgcgcatccgggccgcgaccgaggacaccgtgcgggagacggtcgacgtcggg
cccgtcggcgcgcccgtggacgcggcggcggacgccccggccgaccccgcggcggccctc
gcgggcgagaccgtccaggcgggggatcccggccggcccgccgggcagcgcctcgcgctc
acgtccgtcgacggccgctgggcgctgtacgacgccgacgcgcgcgccctcctcgtcgac
gggcgcacggtcgacctcgccggatccgtggccgcggacgcgcgcgtcgccctccagcgc
gcgtcgtcggacggcggcggcgtgctcgtcgcgcactcgggcggcctggtcgaggtgccc
gtcgcgggcggggatccggtcgtcgtgacaggcgacgtgcgcggcgaccccgcgcgtccc
gtccgcgtctccggctgcgagtacgcgggctgggccgacggatccggctggcagcgctgc
ctcgcccccgcggccctcgcgggcgggggcgacggcgaccgggacgcgcggcgcacgacg
gcgggcgcgacgggcgacctcggatccatgccgcagcaggccgccctgcgcttcctcgtc
gacggcacgcgcgtcgtgctcaacgacacccgcggcggcaccgcgtgggccgtgcagcgc
gacgccggcctcatcgacaactgggccgacctcatcgaccgcgaccgctccgacaccgtc
gtcgagcagaacacggccgacaccccgcccgagaccgaccgcgtgcagcagccgcccgtc
gcggtcgacgacgacctcggcgcgcgccccggccgcaccaccgcgctgcccgtgctcctc
aacgaccacgacccgaacggcgacgtgctcgtgatcgactccgtgacgcccgtcgacgcg
gaggtcggcgtggtcgacatcgtggacgacggccagggcctccagctcgcgctcgccgcg
ggcgcatccggcaccgtgcggttctcctacgtcgtgagcgacgggcgcggcggcacggcg
acggcggacgtgcgcgtcgccgtgcgcggggccgacgagaacgcgccgcccgagcaggcg
cgtcccgccaccggcacggtcgcggagggcgaccggctgcagaccgacgtgctgggcggc
tggtacgaccccgacggggatccgatgtacctcacgcgcgcgagcgtccccgcgcccgac
gccgtcagctggaagcccgaggggcgcgtcgtctacacggacgccggggcgggcggcgac
acgcggaccgtggcgttgcaggtgtccgacgggcgcgaggagggctcgggcgagctcgtc
gtcacggtccgtcgggccggggacgtgccgctcgtcgccgagggcttcgtcgtgcaggcg
gcgatcgggcgcgagatcacggtcgagccgctgacgcacgcgcgcggcgggagcggcgcg
atccggctggccgccgtgcccgcgcgggccggcgtgcagatcacgcccgacctcgaggcc
ggcaccttccgcctcgagggcggacaggcgggcacgcacctgctcgagtacacggtgacc
gacgggcggacgacggccacgggcgtcgtgcgcgtcgaggtgcgcggcgcccccgcgtcc
gacggccggcccgtgaccgtgccgcacaccgtgttcgtgcgcgcgctccaggctcaggac
gtcgacgtgctccagaccgacttcgatcccgcgggcggcgtgctcgtgatcaccgacgcg
gtctcgcccggggacgccgtgggcgtgcgcgcggaggtggtcgggcagcggctcgtgcgg
atcagcctcacccggccgctcgacgggccggtggacgtggagtaccgcgtgagcaacggc
gtcgccgaggcgaccggcgtgatcaccgtgatcgaggtgcccgagccggccgtgcgccag
ccgcccgtcgcgaccgacgaccgcgtggccgtgcgcgtgggcgacgccgtggacatcccc
gtgctcgccaacgaccagcagcccgacggcgaccggctgcgcctcgaccccgtgctcgtg
gatccgctgcccgagggctccggcctcctcttcgcgagcgaggaccgcctccgctacctc
gcgcccgaccgcacgggcgactacaccgccgtctaccgcgcggtcgcgcccgacgggcgg
tgggcgaccgcgaccctcaccgtctccgtgcgcgaggccgacgtcgcgaccaacgccgag
cccgtgccgcggccgctcacggcgcgcgtgctcgcgggggagaccgtgcggatccccgtg
ccgctcaccggcatcgaccccgacggcgactcggtgcggctcctcgggcaggacaccgga
cccgagaagggccaggtcgtcgaggtcgggccggactggatcgactaccaggcgggcgac
tactccaccggcaccgacgcgttcgcgtacgccgtggtcgacgggctcggcgcgcgggcg
accggcacgatccgcgtgggcatcagcccgcgcgtcgagggcgcgaggaaccccgtcgcg
accgccgacaccgtgaccgtgcggcccggccgggtgctgcgcgtgcaggtgctggccaac
gacacggatccggacggcggcgcgctctcgctcgtctcggtgcagccgcaggaggagggc
ctcgtcgcggggctcgacggcgacaccgtgcgcgtcgtcgcgcccgagcaggcgggccgc
tacggcttcgtgtacggcgtgcgcaacgcgcgcggcggcagcgacgaggcgttcctcacc
gtgatcgtggatcccgccgcgccgcccacgcgcccgatcgcgcgcgacacggtgctccag
ctctccgacgtgctcgaccggtcgagcgtcgacgtcgacgtgatgcgcaacgtgttctcg
gcggagggcgacgcgtcgtcgctcgtgctcgccgtcggcgcgggctacgaggacgtcgcg
ctggtgacggacgacggccggatccgcgtcgaggtcggcgacgagcgccgcatcgtcccc
ttcacggtggcgcagcccgacgacccgaccatctccgcgacggccttcgtctgggtgccc
ggcttcgaggacaccctcccgcagctgcgcgtgggcgagccgcggccgaccgtgccgagc
ggcgagcggctcgtggtcgagctcgacgagcaggtggtcgcggcgggcgggcgggccgtg
cgcatcgcggatccgaactcgctgtcggcgacgcacgccgccgggcccgtggagctcgtg
gacgaggacaccatcgcgtaccgcagcgagcccgggtacttcgggccggcggcgatctcg
ttcaccgtgaccgacgggtcgggcgcgggcgggcgcacggccgcgctcgtgctcccgatc
acggtgacgcccaccgagaaccagccgcccgtgttcacgggcgcggtcatcgacctcgag
cccgggcagtccaaggacgtcgacctcggccgcctcaccacctacccgtaccaggacgac
cgcgggcagctcgccttcgccctggagggatccgtcgccgccggcttccgcgcgtccgtc
gacggcggcaccctccgcatctccgccgacgagggcgtcgcgacggggcaggccgcgtcg
ttcccggtgagcgtgcgcgacgccacccagaccggccgcgcgggccgcgtggacctccgg
gtcgtcccctcgacgcgcccgctcgcgcagcccgcgacggacgagggcaccgtgacgcgc
ggatcctccacctccgtcgacgtgctcgccaacgaccaggccggcaaccccttcccgggc
acgccgctcacggtcgcctccatccgcggcgccgacggcgcgagcctccccgcgggcgtc
accgtgacgccgtcggccgaccgcgcgacgctcgccgtgagcgcgtccgccgacgccgtg
cccggcgacgtgcgcgtgcagtacgaggtgcgcgacgccacgggcgacgccggccgggcc
gcgttcggcaccgtcgtgatccacgtgcaggaccgcccgggaccggtctcggccctccgc
gcctccggcttcgcggaccggtcgctcaccgtcgcgttcgagcccggcgccttcaacgga
tccgccatcacgggctaccaggtgcgcgtgctccgcggcggcacggcgaccgcgaccgtc
acctgcccgtcgacgacgtgcaccgtgccgacccccggcaacggtccggggagctccgtg
caggtggaggtctccgccgtgaacggcgtgggcacctcggaccccgtgtcgatctcgggc
ctctggtcggatgtgctcccggccgcgcccgccggcctcgccgtcgagccgctcgtcgac
gggctgcgcctctcgtggcagccgtccgccgtgccgtcgtcgtcgagccccgtcacgcag
tacgtcgtgggggtgggcggcctcacccggcaggtcgcgtccgatgccacgagcgtcgag
gtgcgggatccgtcgctcgtcgccgaggtgcccgtcgccgtctcggtggccgcgcgcaac
agcgcccaggtgcaggacgggaccgcgtggctcgccgccaccgcgaccggcacgccgcgc
ggcgccccgaccgccaccggcgcgcccaccgcggtcgccgacgcggcggacgagacgcgc
gtcaccgtctcgtggccggcgttccagggccagggcgtcgacgggatccgctacctcgtc
gccgcctacgcgccgggatccgcgcccggctgctcggtgcccaccgagggcgtgtcgccg
tggtcggcacagcacggtcccgcggtcgaggtgggcggcgcgaccagccacgtgttcacg
ggcctcgccaccgaccagccggtcgcgttcgcggtgctcgccgccaacagccagggctgc
acggtcgtcgaggccggccagctgaccccgcgcacggcgccctccacgcccgtcgtccgc
gtcgacctgccgagcccggaccggccgggcgacggcgtcttccgcgcggtcctcgccgac
gcgcgctaccggtcgggcagcgcgtccgcgtccgcccagctgctctaccgggtcgacggg
cagggcgacggcgtgccgatcggcgtcggccaggcgctcacgctgccgcgcacgggcgtc
ggcgcgtcgatccaggtgcgcgtcgtcgaggactccggggacgggcgaccgcggtcgagc
ggctggtcggatcccgtctccgccggcaccgccgtggacgcgcgcgcgggcgacgtgcgg
tccgccaccgacgacgcgggcgtcacgaccttctcgtggacctcgatgccgccggccgtg
gccggcttcgggcgtgtcggcgacggcggcgggtacgcgcgcagcgagtggcgctgcggg
ggccagggcgcgtgggcagacgcgtcatcgggcgcggccggatcctgcgcggtcccggcc
ggcggcgagcggatcctcgaggtgcgcgtcaccgcgaactcgggcaacctgtacacgtac
gcccaccgcggatga
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