KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_2230
Entry
CMM_2230          CDS       T00529                                 
Symbol
xseB
Name
(GenBank) putative Exonuclease VII small subunit (YP_062553.1| exodeoxyribo-nuclease VII small subunit [Leifsonia xyli subsp. xyli str. CTCB07]; NP_939304.1| Exodeoxyribonuclease VII small subunit [Corynebacterium diphtheriae NCTC 13129]; NP_824388.1| putative exoribonuclease small subunit [Streptomyces avermitilis MA-4680]). pfam02609, Exonuc_VII_S, Exonuclease VII small subunit. This family consist of exonuclease VII, small subunit EC:3.1.11.6 This enzyme catalyses exonucleolytic cleavage in either 5'->3' or 3'->5' direction to yield 5'-phosphomononucleotides. This exonuclease VII enzyme is composed of one large subunit and 4 small ones.; High confidence in function and specificity
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Pathway
cmi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    CMM_2230 (xseB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmi03400]
    CMM_2230 (xseB)
Enzymes [BR:cmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     CMM_2230 (xseB)
DNA repair and recombination proteins [BR:cmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     CMM_2230 (xseB)
SSDB
Motif
Pfam: Exonuc_VII_S Spectrin_SYNE1 TraB_PrgY_gumN PASTA PMBR
Other DBs
NCBI-ProteinID: CAN02300
UniProt: A5CT75
LinkDB
Position
2523909..2524151
AA seq 80 aa
MPTSPADTGARLPDVSELSYEEARDALVRVVNDLEQGASTLEESIALWERGEALAARCEE
WLLGAKARLDAARTTASDAG
NT seq 243 nt   +upstreamnt  +downstreamnt
atgcccaccagccccgccgacaccggcgcacgcctgcccgacgtctccgagctcagctac
gaggaggcgcgcgacgccctggtgcgcgtcgtcaacgacctcgagcagggcgcgtccacg
ctcgaggagtcgatcgccctgtgggagcgcggcgaagccctcgcggcccgctgcgaggag
tggctgctcggcgccaaggcgcggctcgacgccgcccgcaccaccgcgtccgacgccggc
tga

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