Clavibacter michiganensis subsp. michiganensis: CMM_2418
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Entry
CMM_2418 CDS
T00529
Symbol
fadD
Name
(GenBank) putative long-chain-fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00061
Fatty acid biosynthesis
cmi00071
Fatty acid degradation
cmi01100
Metabolic pathways
cmi01212
Fatty acid metabolism
cmi02024
Quorum sensing
cmi04146
Peroxisome
Module
cmi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CMM_2418 (fadD)
00071 Fatty acid degradation
CMM_2418 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CMM_2418 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CMM_2418 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cmi01004
]
CMM_2418 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmi04147
]
CMM_2418 (fadD)
Enzymes [BR:
cmi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CMM_2418 (fadD)
Lipid biosynthesis proteins [BR:
cmi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CMM_2418 (fadD)
Exosome [BR:
cmi04147
]
Exosomal proteins
Exosomal proteins of breast milk
CMM_2418 (fadD)
Exosomal proteins of breast cancer cells
CMM_2418 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CAN02496
UniProt:
A5CTR5
LinkDB
All DBs
Position
complement(2720863..2722449)
Genome browser
AA seq
528 aa
AA seq
DB search
MTSDTPLQPEHEQPHGGFASVSVAAILAESAERHADRVAVVVGDVSTTYRELWDETRAYA
GALRDRGVGEGTRVAMLIPNVADFPRVYYAVLALGGVVVPVHALLKSEEIAYVLRDSGSA
LLVCAGPLLEQGAKGAALADVPVISVLVPASTEGGPDRLEELAQAATPIRTYVPRRPSDT
ATILYTSGTTGQPKGAEGSHLALVMQVDVLILDTFDLRAGDRILGCLPLFHTFGQTCTMN
ASFRAGATIVMVPRFDGDTALALMVEHETQVFMGVPTMYFALLAAAARNPARPVLRYAIS
GGAAIPVAVIDAFREQFDAEIHEGYGLTETSPVASFNHVGVPARPGTVGKPIWGVQIEIA
DPEHEDRVELVERGTLGEIVIRGHNLMNGYLHRPEDTARAVVDGWFRSGDLGTIDEDGYI
RVVDRTKDMILRNGYNVYPREVEEVLARHEAVAQCAVFGVPHEEHGQEIVAAIVPKADAT
VDAAEVVAYMKERIASYKYPRRVEVVEALPLGPSGKILKRTLVERFGA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgacacgcccctccagcccgagcacgagcagccccacggcgggttcgcctcc
gtctcggtcgccgcgatcctcgccgagtccgccgagcggcacgccgaccgggtcgccgtg
gtcgtcggcgacgtctccaccacctaccgcgagctctgggacgagacgcgcgcctacgcg
ggcgccctccgcgaccgcggggtgggcgagggcacgcgcgtcgcgatgctcatcccgaac
gtcgccgacttcccgcgcgtctactacgcggtgctcgcgctcggcggcgtggtcgtgccc
gtgcacgcgctgctgaagagcgaggagatcgcgtacgtgctgcgcgactccggatccgcg
ctcctggtctgcgccggcccgctgctcgagcagggcgcgaagggcgcggcgctcgccgac
gtgccggtcatcagcgtgctcgtgccggcctccaccgagggagggcccgaccggctcgag
gagctcgcgcaggccgcgacgcccatccgcacctacgtgccgcgtcggccgtcggacacc
gcgacgatcctctacacctccggcaccaccggccagccgaagggcgcggagggcagccac
ctcgcgctcgtgatgcaggtcgacgtgctcatcctcgacaccttcgacctgcgcgccggc
gatcggatcctcggctgcctgcccctgttccacaccttcgggcagacctgcaccatgaac
gcgtcgttccgggcgggcgccacgatcgtgatggtgccgcgcttcgacggcgacaccgcg
ctcgcgctcatggtcgagcacgagacccaggtgttcatgggcgtgcccaccatgtacttc
gcgctgctcgcggccgccgcccggaaccccgcgcgcccggtcctccgctacgccatctcg
ggcggcgccgcgatccccgtcgccgtcatcgacgcgttccgcgagcagttcgacgccgag
atccacgagggctacggcctcaccgagacctcgcccgtcgcgtcgttcaaccacgtcggc
gtaccggcccggcccggtacggtcgggaagccgatctggggcgtgcagatcgagatcgcc
gaccccgagcacgaggaccgcgtggagctcgtcgagcgcggcacgctcggcgagatcgtg
atccgcggccacaacctcatgaacggctacctgcaccgccccgaggacacggcccgcgcg
gtcgtcgacggctggttccgctcgggcgacctcggcaccatcgacgaggacggctacatc
cgcgtggtcgaccggacgaaggacatgatcctgcgcaacggctacaacgtgtacccgcgc
gaggtcgaggaggtgctcgcccggcacgaggccgtcgcgcagtgcgccgtgttcggcgtg
ccgcacgaggagcacgggcaggagatcgtcgcggcgatcgtgccgaaggcggacgccacc
gtcgacgcggcggaggtcgtcgcgtacatgaaggagcgcatcgcctcctacaagtacccg
cggcgggtcgaggtggtcgaggcgctgccgctcgggccgagcggcaagatcctgaagcgg
acgctcgtcgagcggttcggcgcgtga
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