Clavibacter michiganensis subsp. michiganensis: CMM_2581
Help
Entry
CMM_2581 CDS
T00529
Symbol
truA
Name
(GenBank) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmi03016
]
CMM_2581 (truA)
Enzymes [BR:
cmi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CMM_2581 (truA)
Transfer RNA biogenesis [BR:
cmi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CMM_2581 (truA)
Prokaryotic type
CMM_2581 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Polyketide_cyc2
Motif
Other DBs
NCBI-ProteinID:
CAN02664
UniProt:
A5CU77
LinkDB
All DBs
Position
complement(2917061..2918065)
Genome browser
AA seq
334 aa
AA seq
DB search
MSEDAEAGDAGTRLRLDIAYDGTGFAGWAKQPGLRTVQGALEDALAQLLARTPPAPTLVV
AGRTDAGVHATGQVAHLDLTDEQIASLDRPPRGRAAAADAGEGAHVPSVDRAAAALARRL
NGVLGARSDVVVLACAPAPDGFDARFSATWRAYRYRISDVDGPRDPLQRHRTVELPVALD
AAVLQEAADALLGLHDFAAYCKPREGASTIRTLQELTWTRASDGALEATVRADAFCHSMV
RALVGACVAAASGRVGVTRLRELLELRERTSEFTVMPARGLVLERVGYPPDAELRARNEI
TRAKRGAHEVDTVAEGAATAARDLARLADTPGIA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggatgccgaggcgggggacgccggcacgcgcctccgcctcgacatcgcgtac
gacggcacggggttcgccggttgggcgaagcagcccgggctgcgcaccgtgcagggtgcc
ctcgaggacgcgctcgcgcagctgctggcgcggacgccgccggcgccgacgctcgtcgtc
gccgggcgcaccgacgcgggcgtccacgcgaccgggcaggtcgcgcacctcgacctcacg
gacgagcagatcgcgtccctcgaccggccgccgcgcggtcgtgcggccgcggcggacgcg
ggggagggggcgcacgtcccctccgtcgaccgcgccgcggcggccctcgcgcgccgactg
aacggcgtgctcggcgccaggtccgacgtcgtggtgctcgcctgcgcccccgcccccgac
gggttcgacgcgcgcttctccgcgacctggcgggcgtaccgctaccggatctcggacgtc
gacggcccccgcgaccccctccagcggcatcgcaccgtcgagctgccggtcgcgctcgac
gcggccgtgctgcaggaggcggccgacgcgctcctcggcctgcacgacttcgccgcatac
tgcaagccgcgcgagggggcctcgaccatccgtacgctccaggagctgacctggacccgc
gcgtcggacggcgcgctcgaggcgacggtccgcgcggacgcgttctgccacagcatggtg
cgcgcgctcgtcggggcgtgcgtcgccgcggcgtccgggcgcgtcggggtcacgcggctc
cgcgagctgctggagctgcgcgagcgcacgagcgagttcaccgtgatgcccgcgcgcggc
ctggttctcgagcgggtgggctacccgccggacgcggagctccgagcgcggaacgagatc
acgcgcgccaagcgcggcgcgcacgaggtggacacggtcgcggagggcgccgcgacggcc
gcccgcgacctcgcccggctggccgacacgcccgggattgcctga
DBGET
integrated database retrieval system
