KEGG   Clavibacter michiganensis subsp. michiganensis: CMM_2759
Entry
CMM_2759          CDS       T00529                                 
Name
(GenBank) unnamed protein product; putative alkylation damage DNA repair protein (YP_062931.1| alkylation damage DNA repair protein [Leifsonia xyli subsp. xyli str. CTCB07]; NP_825887.1| putative DNA repair protein [Streptomyces avermitilis MA-4680]). Serine protease family S16 !non-peptidase-homologs!; Function unclear
  KO
K04485  DNA repair protein RadA/Sms
Organism
cmi  Clavibacter michiganensis subsp. michiganensis
Brite
KEGG Orthology (KO) [BR:cmi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmi03400]
    CMM_2759
DNA repair and recombination proteins [BR:cmi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CMM_2759
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB ChlI Lon_C DnaB_C AAA_22 AAA AAA_16 IstB_IS21 RecA AAA_30 nSTAND3 NTPase_1 DAP3 AAA_19 AAA_5 ATP-synt_ab ATPase_2 AAA_24 CbiA NACHT AAA_14 AAA_18 Bac_DnaA MMR_HSR1 KdpD AAA_31 AAA_29 ArsA_ATPase NPHP3_N ABC_tran DUF2642 SLFN-g3_helicase ParA KTI12
Other DBs
NCBI-ProteinID: CAN02843
UniProt: A5CUQ6
LinkDB
Position
3090292..3091683
AA seq 463 aa
MSVPAGRVPRMARTHSTYRCSECGWTTPKWVGRCAECQSWNTVAEVSQTPAAAGRVTTLT
PAGSSQARSIMHVGTASASHRPSGVGELDRVLGGGIVPGAAILMSGEPGVGKSTLLLEVA
ARAAAKGAKVLYVTAEESVAQVRMRAERTGGLQESLMIAAETDLGTILGHIEQVAPDLLI
VDSVQTVSSSASDGLPGHPGQVREVAVTLIRVCKERDLPLLLVGHVTKDGSIAGPRLLEH
LVDVVCQFEGDRQTSLRFIRALKNRFGPTDEVGCFEMAGDGIVEVPDPSGMFLSRGVHSV
SGTCVTVAMEGRRALPVEVQALVVDTKAPQPRRVVNGVDASRVAMLLAVLEKRANVRLSD
RDVYVSTVGGVRLTEPAADLAIAVALVSAVNGKAMPHDLAAFGEISLAGEIRGVTSAPQR
AAEARRLGFTQIVDAEWGPLFSALGRAFSLAKSEREKELDEAF
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtcggtgcccgccggtagagtcccccgcatggcccgcacccactccacgtaccgctgc
tcggagtgcgggtggacgaccccgaagtgggtcggccggtgcgccgagtgccagagctgg
aacaccgtcgccgaggtgtcgcagacgcccgccgcggccggccgggtcaccacgctcacg
cccgcgggatccagccaggcgcgctcgatcatgcacgtcggcaccgcgtccgccagccac
aggccgagcggcgtcggcgagctcgaccgcgtgctcggcggcggcatcgtgccgggcgcg
gccatcctcatgagcggcgagcccggcgtcggcaagtccacgcttctgctcgaggtcgcg
gcccgggccgccgcgaagggcgcgaaggtcctctacgtcacggccgaggagtccgtcgcg
caggtgcgcatgcgcgcggagcgcacgggcgggctgcaggagtcgctcatgatcgcggcc
gagaccgacctcggcacgatcctcggccacatcgagcaggtggcgcccgacctcctcatc
gtcgactccgtgcagaccgtctccagcagcgcgtccgacggcctgcccggccaccccggc
caggtgcgcgaggtcgcggtcacgctcatccgcgtctgcaaggagcgcgacctgccgctc
ctgctcgtcggccacgtcacgaaggacggatccatcgccggcccgcggctcctcgagcac
ctggtcgacgtggtctgccagttcgagggcgaccggcagacgtcgctgcgcttcatccgg
gcgctcaagaaccgcttcggcccgaccgacgaggtcggttgcttcgagatggcgggcgac
ggcatcgtcgaggtcccggatccgagcggcatgttcctctcgcgcggcgtccactcggtc
agcggcacgtgcgtcaccgtcgctatggagggtcgccgcgccctgcccgtggaggtgcag
gcgctcgtcgtcgacacgaaggccccgcagccgcgccgggtcgtcaacggggtcgacgca
tcccgcgtcgcgatgctgctcgcggtgctggagaagcgggccaacgtgcggctctcggat
cgcgacgtctacgtctccacggtcggcggcgtgcgcctcaccgagcccgcggcggatctc
gccatcgccgtcgcgctcgtctccgccgtcaacggcaaggccatgccgcacgatctcgcg
gcgttcggcgagatcagcctcgcaggcgagatccgcggcgtcacgtcggcgccgcagcgc
gcggcggaggcccggcggctcggcttcacgcagatcgtcgacgccgagtggggcccgctg
ttctccgcgctcggccgcgcgttctccctcgcgaagagcgagcgggagaaggagctcgac
gaggcgttctga

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