Clavibacter michiganensis subsp. michiganensis: CMM_2888
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Entry
CMM_2888 CDS
T00529
Symbol
crtE
Name
(GenBank) putative geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Pathway
cmi00900
Terpenoid backbone biosynthesis
cmi01100
Metabolic pathways
cmi01110
Biosynthesis of secondary metabolites
Module
cmi_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CMM_2888 (crtE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cmi01006
]
CMM_2888 (crtE)
Enzymes [BR:
cmi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CMM_2888 (crtE)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CMM_2888 (crtE)
2.5.1.29 geranylgeranyl diphosphate synthase
CMM_2888 (crtE)
Prenyltransferases [BR:
cmi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CMM_2888 (crtE)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Se-cys_synth_N
Tnp_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
CAN02974
UniProt:
A5CV35
LinkDB
All DBs
Position
complement(3212702..3213724)
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AA seq
340 aa
AA seq
DB search
MNGVLDAFFARSLVRAEVMGDEYVKLWRTLESNTAGGKRFRPRMVMAAYDGLGGQDVQAA
AHVGAAFEMLHTALIVHDDVIDRDFTRRGGPNVSGAYRDIATTQGLPQPLAEHRGMSAAV
IAGDLALVNAYRLIDASGVRDLTRSHLMEILDDAVFASAAGELIDVEFSLTADVPSVDEI
LRMERLKTAVYSFEAPLQAGAVLAGASPAIVSALGDFGRDIGIAYQVVDDVLGVFGDEQE
TGKTNLGDLREGKRTVLIAHAVRSSEWGEISALVGKDDLSRGEAALVRSVLESSGARAYA
EGVARDLAVAAVARLDDPVVPEALRRELAPVAESVLGRIR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggcgtgctggatgcgttcttcgcccgctcgctcgtccgcgcggaggtcatgggc
gacgagtatgtgaagctctggcgcacgctcgagtccaacaccgccggcggcaagcgcttc
cgcccgcgcatggtcatggccgcgtacgacggcctcggcggccaggacgtgcaggccgcg
gcccacgtcggcgccgcgttcgagatgctgcacaccgcgctcatcgtccacgacgacgtc
atcgaccgcgacttcacgaggcgcggcggacccaacgtctccggcgcctaccgcgacatc
gccacgacgcagggcctgccgcagccgctcgcggagcaccgcggcatgtcggccgccgtc
atcgcgggggatctggcgctcgtcaacgcgtaccgcctcatcgacgcgagcggcgtgcgc
gacctcacgcggtcgcacctgatggagatcctcgacgacgccgtgttcgcgtcggccgcg
ggtgagctcatcgacgtcgagttctcgctcaccgcggacgtgccgagcgtcgacgagatc
ctccgcatggagcgcctcaagaccgccgtctactcgttcgaggcgccgctgcaggcgggc
gccgtgctcgcgggcgcgagccccgcgatcgtctcggcactcggcgacttcggccgcgac
atcggcatcgcctaccaggtggtggacgacgtgctcggcgtattcggcgacgagcaggag
accggcaagacgaacctcggcgacctccgcgagggcaagcgcacggtgctcatcgcgcac
gccgtccgctcgtcggagtggggcgagatcagcgcgctcgtcggcaaggacgacctgtcc
cgcggcgaggcggccctcgtccgctcggtgctggagagctcgggcgcccgggcctacgcc
gagggcgtcgcgcgggatctcgcggtcgccgccgtcgcgcgcctcgacgacccggtcgtg
ccggaggcgctccgccgggagctcgcgcccgtcgcggagtccgtgctcgggcgcatccga
tga
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