Clavibacter michiganensis subsp. michiganensis: CMM_2934
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Entry
CMM_2934 CDS
T00529
Symbol
hupB
Name
(GenBank) putative DNA-binding protein Hu
KO
K03530
DNA-binding protein HU-beta
Organism
cmi
Clavibacter michiganensis subsp. michiganensis
Brite
KEGG Orthology (KO) [BR:
cmi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmi03032
]
CMM_2934 (hupB)
03036 Chromosome and associated proteins [BR:
cmi03036
]
CMM_2934 (hupB)
03400 DNA repair and recombination proteins [BR:
cmi03400
]
CMM_2934 (hupB)
DNA replication proteins [BR:
cmi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CMM_2934 (hupB)
Chromosome and associated proteins [BR:
cmi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CMM_2934 (hupB)
DNA repair and recombination proteins [BR:
cmi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CMM_2934 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
CAN03021
UniProt:
A5CV82
LinkDB
All DBs
Position
complement(3257527..3257814)
Genome browser
AA seq
95 aa
AA seq
DB search
MADKSLNRTELVAAVAAESGQSQAAVNGVLDALFSTVATNVADGVKVTIPGWVAFEQTAR
AARTGRNPQTGEPLEIKASKGVKVSAGSKLKAAVK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagtcactcaaccgcaccgagctcgttgccgccgtcgccgcggagtcgggc
cagagccaggccgccgtcaacggcgtcctggacgcgctcttctccaccgtcgcgaccaac
gtcgccgacggcgtcaaggtcacgatcccgggctgggtcgcgttcgagcagacggctcgc
gccgcgcgcaccggccgcaacccgcagacgggcgagccgctcgagatcaaggcgtccaag
ggcgtcaaggtctccgccggcagcaagctcaaggcagccgtcaagtag
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