KEGG   Caldinitratiruptor microaerophilus: caldi_03910
Entry
caldi_03910       CDS       T08566                                 
Name
(GenBank) CRISPR-associated Csd1 family protein
  KO
K19117  CRISPR-associated protein Csd1
Organism
cmic  Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:cmic00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cmic02048]
    caldi_03910
Prokaryotic defense system [BR:cmic02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    caldi_03910
SSDB
Motif
Pfam: Cas_Csd1
Other DBs
NCBI-ProteinID: BDG59301
UniProt: A0AA35G6R4
LinkDB
Position
411755..413470
AA seq 571 aa
MLLQRLNEYADRLRLPPPMYGPTAVRWVIHLDTDGRMLQMVETTGGTTKSTQRGKVMLTP
QIGRTVAIRAKLLADNGEYVLGIPRKPEDADKVVLRHRAFIDLVRECALATGELTVKAVL
QFLEGLPHGLRLPSGFDPADNITFEVAGIRPIDLPVIQRFWAKRAGAEKENADDDTGRVA
TCLVCGELKQVVARLPFKLKSIPGGQTSGIALVSANAPAFESYGLEASHVAPICHQCAER
THKSINALLADPNTHLVVGPIVYVAWTREPVEQNFLNLLSRPDPAEVRALIASVYTGRAG
SLELDDTQYYAVAFSASGGRAVVRDWLDTTVGEVRRNLARFFMLQRIIGPDGNEPAPLGI
FALSAAAVRDASRDLPPELPKALIRCALAGTWIPSWILAQAIRRARVEQRVTRQRAALIR
LSYLSYMRIEKEDELMQLDRTQRDPAYHCGRLLAVLEEIQHAAVPGAKATLLDRFYGAAS
ASPATVFGTLFRTAQSHLGKLRKDRPRLYNVFQQRLMEVQESITYFPATLNLGEQALFTL
GYYHQRAADLAAARARSQKAEDTETDESDDE
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgctcttacagcggctgaacgagtatgcggatcggttgcggctgccgccaccgatgtac
ggccccaccgcggttcgctgggtgatccaccttgataccgacgggcgaatgttgcagatg
gtcgagacaaccggcgggaccacgaaaagtacacagcggggcaaagtaatgttgacgccg
cagatcgggcgaacagtagcgattcgagccaagttacttgctgacaacggtgagtacgtt
ctaggcattccccgcaagcctgaggacgcagacaaggtggtgttgcgtcaccgagctttt
atagacctagttcgtgaatgcgccctcgccacgggagagctcacggtgaaggccgttcta
cagttcctcgagggattgccgcatggtcttcgcttgcccagcggcttcgatccggcggat
aacatcaccttcgaggtcgctgggatccgtcccattgacttgccggttatccaacgcttt
tgggccaagcgcgcgggcgcggagaaggagaatgcggacgacgatactggccgggtcgcc
acgtgcttggtttgcggcgaattaaagcaagttgtcgcgcggctacccttcaagctaaag
agcattccgggaggacaaacctctggaattgccctcgtctccgccaatgcaccagcgttc
gagtcctatggcctcgaagcctcgcatgtcgcaccgatttgccaccagtgtgctgagcgg
acccacaagtcgataaatgcgctcctggccgaccctaacacgcatctggtcgtcggtccg
atcgtgtacgtggcgtggacacgggagcctgtggagcagaatttcttgaatcttctctcg
cgtccggatcctgccgaagttcgtgccttgattgcttccgtatacacgggccgagcgggt
tccctagaactggatgacacgcagtactacgcggtggccttctctgccagcggtggacga
gcggtcgtacgcgattggcttgatacaacggtgggggaagtgagacgcaatcttgcccgc
ttcttcatgctacaacgtatcatcggtccagatggcaacgagcccgcgcccctcgggatc
ttcgccttgtccgcagcagctgttcgggatgcctcgcgggacctacctccagagcttccc
aaggcgttgattcgatgcgcgttggccgggacgtggattcccagctggatccttgcccag
gcaatcaggcgagcccgcgtggaacagcgggtgacccgtcagcgtgcggctctaatccgt
ttgtcctatctctcctacatgcggatcgaaaaggaggatgagttgatgcagttggatcgt
acgcagagagatccggcttaccactgcggccgccttctcgctgttcttgaggaaatccag
cacgcggccgtaccgggtgcaaaggccacgctattggaccgattctacggtgctgcttcc
gcaagcccagccaccgttttcggaactctcttccgtaccgcccagtcgcacctgggtaag
ctgcgtaaggaccgtccgcgcctttacaacgtgttccagcaacgactcatggaagtacag
gaatcgatcacgtacttcccggcaacgttgaacctcggggaacaggcacttttcactctt
ggctactaccaccagcgggcggccgatctggccgccgccagggctcgctctcagaaagcg
gaagatacggaaaccgacgagtctgatgacgagtga

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