Caldinitratiruptor microaerophilus: caldi_10600
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Entry
caldi_10600 CDS
T08566
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
cmic
Caldinitratiruptor microaerophilus
Pathway
cmic03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
caldi_10600 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmic03400
]
caldi_10600 (ku)
DNA repair and recombination proteins [BR:
cmic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
caldi_10600 (ku)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
BDG59970
UniProt:
A0AA35CIS2
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All DBs
Position
1072736..1073575
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AA seq
279 aa
AA seq
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MRSLWRGTISFGLVTIPVKLYAATEDRDVHFRLLHRECKTPIRYRRWCPRCEREVEAGDL
VRGYEHEPDRFVVIEEEDLESLPVAAARTVEILDFVRLEDIDPIYFLRTYFVEPGDGGAK
AYALLRRALQATGRIGLARVALRGRSSLAAVRVYRQDCLCLETMRFPDEIRSHAGLQIPA
DEGYRDQELEMARLLISTLSTEFVPERLRDEYREALLERIREKVAGDQVYRVEAPEPTAR
VADLMEALRQSVRLAEAARGPASGVPAADGAGPRPAPPH
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcctgtggcggggcacgatcagcttcggcctggtgaccatcccggtgaagctc
tacgcggccaccgaggaccgggacgtgcacttccgcctgctgcaccgggagtgcaagacg
cccatccggtaccgccgctggtgccctcgctgcgagcgcgaggtggaggccggggacctc
gtccgggggtacgagcacgagccggaccggttcgtggtgatcgaggaggaggacctcgaa
agcctgcccgtcgccgccgcccgcaccgtggagatccttgactttgtacggctcgaggac
atcgacccgatctacttcctccggacctacttcgtggaacccggcgacggcggggcgaag
gcatacgccctcctgcgccgcgccctgcaggcaacgggccgcatcggcctggcaagggtg
gcgctgcggggccggtcgtccctggccgcggtgcgggtgtaccgccaggattgcctctgc
ctcgagaccatgcgcttcccggacgagattcgctcccacgccgggctccagatcccggcc
gacgaggggtaccgcgatcaggaactcgagatggcccggctcctgatctcgaccctgtcc
acggagttcgtgccggagcggctgcgcgacgagtaccgggaggcgctgctcgagcggatc
cgggagaaggtggccggggaccaggtgtaccgggtggaggcgccggagcccacggcgcgg
gtggccgacctgatggaggccctccggcagagcgtgcgcctggccgaggcggcgcgcggc
ccggcgagcggggtgcccgcggcggacggggccggaccccgcccggcgccgccgcactga
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