Caldinitratiruptor microaerophilus: caldi_10690
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Entry
caldi_10690 CDS
T08566
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
cmic
Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmic03009
]
caldi_10690
Enzymes [BR:
cmic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
caldi_10690
Ribosome biogenesis [BR:
cmic03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
caldi_10690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BDG59979
UniProt:
A0AA35CK49
LinkDB
All DBs
Position
1080500..1081576
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AA seq
358 aa
AA seq
DB search
MARRDKPTSRPESGRKKVPGREDTARRRPAPGRRRAAETGLVTGEPERLQKILARAGVAS
RRHSEELILAGRVRVNGEVVTRLGTRAVAGVDRIEVDGRPIGEREPLAYVVLNKPKGYVT
TLHDPEGRPTVVDLIEGAPVRLYPVGRLDYDTEGLLLLTNDGELAHALAHPSSEVSKTYV
ARVRGVPTAAKLRTLEQGVRLEDGITAPARVRLLAVRTDRRNPRNQVATVELTIHEGRNR
QVRRMLAAVGHEVIQLTRTRVGPLRLAGLAPGEFRYLTLRDIKSLRHAAGLPADPPGPLA
PVPAGPERGAAGVPEPSPAPSPRRPPSRRPGARQGPAGAAGKPPRKEMRRSATKSSRA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcgggacaagcccacgtcacggccggagtcgggcaggaaaaaggttcccggc
cgggaggacaccgcccggcggcggccggccccgggccggcgccgcgccgcggagaccggc
ctggtgaccggggagccggaacgcctgcagaagatcctggcccgcgccggcgtggcctcc
cggcggcacagcgaggagctcatcctggccggccgcgtccgcgtcaacggagaggtggtc
acccggctcggcacccgggcggtggccggggtggaccggatcgaggtcgacggccggccc
atcggcgagcgggagccgctggcctacgtggtcctgaacaagccgaagggctacgtgacc
acgcttcacgaccccgaggggcgccccacggtggtggatctcatcgagggcgccccggtg
cggctgtacccggtcggccgtctcgactacgacacggaggggctcttgctgctcaccaac
gacggcgagctggcccacgcgctggcccacccgtcctccgaggtcagcaagacgtacgtg
gcccgggtccggggggtcccgacggccgccaagctccggaccctcgagcagggcgtgagg
ctcgaagacggcatcaccgccccggcccgcgtgcggctcctggcggtgcgcaccgaccgg
cgaaacccccggaaccaggtggcaacggtggagctcaccatccacgagggccgcaaccgc
caggttcgccgcatgctggcggcggtggggcacgaggtcatccagctgacccggacccgg
gttggcccccttcggctggccggcctggccccgggggaattccgctacctgacgctgcgc
gacatcaagagcctgcggcacgccgccgggctcccggccgacccgcccggcccgctggcc
ccggtgccggccgggccggagcgcggcgcagccggcgtgcccgagccgtcgccggcccca
tcgccccggcgcccgccgtcccggcggcccggggcccgccaggggccggccggggccgcg
gggaagccgccccggaaggagatgcggcgctccgcaacgaaatcttcgcgagcctga
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