Caldinitratiruptor microaerophilus: caldi_10860
Help
Entry
caldi_10860 CDS
T08566
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cmic
Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmic03016
]
caldi_10860 (miaB)
Enzymes [BR:
cmic01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
caldi_10860 (miaB)
Transfer RNA biogenesis [BR:
cmic03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
caldi_10860 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
BDG59996
UniProt:
A0AA35CMD0
LinkDB
All DBs
Position
1096938..1098404
Genome browser
AA seq
488 aa
AA seq
DB search
MDREIDLALTPPGESDRAGGARLAGALNLDPDTARRLHARLDPKVYIETFGCQMNEHDTE
IMYGILGRMGYAQASGPEEADVLLFNTCAIRESAVEHALGRIGQLKPLKYKNPDLVVGVC
GCLPQVEGQTERLLRMFPHLDLIFGTHNIHQLPELIERARHERETVVDVWESMGPDGIPE
RLPVQRAGTLKAWVTIIYGCNKRCSYCIVPRTRGRERSRLPEDIVAEVQELGRQGYKEIT
LLGQNVNAYGKDLGYTDFGDLLTLLDQSSPGIERIRFTTNHPKDFTPKMVEAIARAPKVC
EWLHLPVQSGSDAVLRRMRRSYNRRQYLDLVRRIREWMPDAVITTDIIVGFPGETEDDFR
QTLSLVEEVGYDAAFMFMFSPRAGTEAATLPDQLPQEVKKERLQRLIELQNRVSLAKNQA
MVGRVEEILVEGLDKGKADRVYGRTRGNKLVTAPGSADLIGRLVPVRITEAHIWTLEGSV
VEAAVATG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgagatcgatctcgccctgaccccgcccggtgagtcggaccgggcaggcggg
gctcgtcttgccggcgcgctgaacctcgacccggacacggcccggcgcctgcacgcgcgg
ctggatccgaaggtttacatcgagacgttcggctgccagatgaacgagcacgatacggag
atcatgtacggcatcctcggccgcatgggctacgcgcaggcgtccgggcccgaggaggcc
gacgtgctcctgttcaacacctgcgccatccgggagagcgccgtggagcacgccctgggg
cgcatcggccagctcaagcccctgaagtacaagaacccggacctcgtcgtcggggtgtgc
gggtgcctgccacaggtggagggccagacggagcgcctcctgcgcatgttcccgcacctg
gacctcatcttcggcacccacaacatccaccagctgccggagctcatcgagcgagcgcgg
cacgaacgcgagaccgtggtggacgtgtgggagtcgatggggccggacggaatccccgaa
cgcctccccgtccagcgggcgggcaccctgaaggcgtgggtgaccatcatctacggctgc
aacaagcgctgcagctactgcatcgtcccgcgcacccggggccgcgagcgcagccggctc
ccggaggacatcgtcgccgaggtccaggagctcggccggcagggctacaaggagatcacc
ctgctcggccagaacgtgaacgcgtacggcaaggacctgggatacacggacttcggcgac
ctgctcactctcctcgaccagtcgagcccgggcatcgagcggatccggttcacgacgaac
caccccaaggacttcaccccgaagatggtggaggccatcgcccgggcccccaaggtgtgc
gagtggctgcacctgcccgtgcagagcgggtccgacgcggtgctgcggcgcatgcggcgc
agctacaaccggcgccagtacctggacctcgtccgccggatccgcgagtggatgcccgat
gcggtgatcaccacggacatcattgtggggttccccggcgagaccgaggacgacttccgc
cagaccctgtccctggtcgaggaagtgggttacgacgccgccttcatgttcatgttctcg
ccccgcgcgggcacggaggcggccacgctgcccgaccagctgccgcaggaggtcaagaag
gagcgcctgcagcggctcatcgagctgcagaaccgcgtcagcctggccaagaaccaggcc
atggtgggccgcgtggaggagatcctggtcgaggggctcgacaagggcaaggcggaccgg
gtgtacggccgcacccgcgggaacaagctggtgacggcccccggcagcgccgacctcatc
ggccgcctggtgccggtccggatcacggaggcgcacatctggacgctcgagggctcggtc
gtcgaggctgccgtggcgaccggctga
DBGET
integrated database retrieval system
