KEGG   Caldinitratiruptor microaerophilus: caldi_11520
Entry
caldi_11520       CDS       T08566                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
cmic  Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:cmic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmic03400]
    caldi_11520
Enzymes [BR:cmic01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     caldi_11520
DNA repair and recombination proteins [BR:cmic03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    caldi_11520
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD Rv2179c-like ResIII Helicase_C AAA_30 DEAD_2 SecA_DEAD
Other DBs
NCBI-ProteinID: BDG60062
UniProt: A0AA35CJ07
LinkDB
Position
complement(1163836..1166730)
AA seq 964 aa
MLVERYVAVDLETTGGDPAADRIIEIGAVVFEHGQEVAARSWLTDPGRPIPLRFQQLTGI
TPADVAGRPPAEAVLPEFLALVGGSPVVAHNAAFDGAFLAAALRRAGLPALPPLLDTVQL
ARLAFPLARSFRLGALAEELGVGLPRAHRAVDDARACGRIAALCLDRIEAMELAVLDDLG
RLAPPANALSRLLEKARARRQAAGEAPRDRRAWIPPAAVPLHGPEDEEEPEAPPALDPGE
VDAVLGPGGAVASAFAVRSGRPYEHRPQQLELARRVVTALGRGQVLVAEAGTGTGKSLAY
LVPALLWAKRGGGRVVVSTHTITLQEQLWERDLPFLLRALGWEDEVPVALAKGRSNYVCL
RKWEEAVEGADLATGPDEREFLLRTVPWLAQTDTADRAELGVLAAQEEYWRRIQSESVTC
LGQRCRWYQRHCFAFRARRRARDARVLVVNHALLLSDLKAGGGVLPPYEHVIIDEAHHLE
SAATEHLGVALGQWDLAGSLLRLYRPSRGTAPGGVLPAVARRLREARPEVEELLRQVQEA
RERVDELFGLAGALALATGGGEEDGARSLRVTPAVRARPEWDTIRLAHENAGVALGRLAK
GLRRLGEELEQLAGAGHGGLDSLRLEVAREEAVVRQAVRDLDTVLAQHGPEMVRWIEAQP
PRSGGDRPAAVTLRAAPVHVGPLLRELLWDRVRSAVLTSATLTVGGRFDHVLERLGLDAL
PEGRLALAQVPSPFRYGEQALVLIPEDIPTPRAGEAEFQAAATRLLADLLVQVGGRTLVL
FTSHRQLRQVYNELKGPLEAAGLVLLAQGLDGARGRLVEEFRAGERAVLMGSASFWEGVD
IPGEDLSCVVVVRLPFQPPGDPVMEARSEDLEARGLSAFQHLSLPEAIIRFKQGFGRLIR
TGTDRGVVVVLDRRIDPREARYGRQFLRSLPDPRVATAPADEIATLAARFLRDPPGTAAM
HGEA
NT seq 2895 nt   +upstreamnt  +downstreamnt
gtgctggtcgagcggtacgtggcggtcgacctggagaccaccggcggggacccggccgcc
gaccggatcatcgagatcggggccgtggtcttcgagcacggccaggaggtggcggcccgg
tcctggctcaccgaccccggccgccccatcccgctgcgtttccagcagctgaccggcatc
acacccgcggacgtggccggccgtccgccggcggaggcggtcctgcccgagttcctcgcg
ctggtcggcggctcgccggtggtcgcgcacaacgccgccttcgacggcgccttcctggcg
gccgccctccgccgggccgggctgcccgcgctgccgccgctcctggacaccgtgcagctg
gcccggctggcgtttcccctggcccgcagcttccgcctcggcgccctggccgaggagctg
ggggtcgggctgccgcgcgcccaccgcgcggtggacgacgcgcgggcctgcggccggatc
gccgccctgtgtctggaccggatcgaggcgatggagctggcggtgctcgacgacctgggc
cggctcgcgccgcccgccaacgcgctctcccgcctcctggagaaggccagggctcgccgt
caggccgccggcgaggcgccccgcgaccgcagggcctggatccccccggccgccgtgccg
ctgcacgggcccgaggacgaggaggagccggaggcgcctcccgccctggaccccggggag
gtcgacgccgtgctcggccccggaggcgccgtggcgagcgccttcgcggtccggtcaggc
cggccgtacgagcaccggccgcagcagctcgaactggcccgccgggtggtcacggccctc
ggccgggggcaggtcctcgtggcggaggccgggacaggtacgggcaagtccctggcctac
ctggtgcccgcgctgctctgggcgaagcgcggcgggggacgggtcgtcgtctccacccac
acgatcacgctgcaggagcagctgtgggagcgcgacctcccgttcctcctccgggcgctc
ggctgggaggacgaggtgccggtcgccctggccaagggccgctcgaactacgtctgcctt
cgcaagtgggaggaggccgtggagggggcggacctggccacgggacccgacgagcgggaa
ttcctcctccgcaccgttccgtggctggcacagaccgacacggctgaccgggccgaactc
ggggtgctggccgcccaggaggagtactggcggcggatccagtccgagtccgtgacctgc
ctggggcagcgctgccgctggtaccaacggcactgcttcgccttccgcgcccggcgccgg
gcccgggacgcccgcgtcctggtggtgaaccacgccctccttctctccgacctgaaggcc
gggggcggcgtgttgcccccctacgaacacgtgatcatcgacgaggcgcaccacctggag
agcgcggcgaccgagcacctcggcgtggccctcgggcagtgggacctggccggtagcctc
ctgcgcctttaccggccttcgcgcgggaccgccccgggaggagtcctgccggccgtggcg
cggcggctccgcgaggcccggccggaggtcgaggaactcctccgccaggtgcaggaagcc
cgggagcgggtcgacgagctgttcggcctggccggggccctggcgctggctaccggcggc
ggggaggaggacggtgcccgctccctgcgcgtcacccctgccgtccgggcgcgcccggaa
tgggacacgatccggctcgcccacgagaacgcgggagttgccctcgggcgcctggcgaaa
gggctgcgccggctcggcgaggagctggagcagctggccggtgcgggccacggcgggctc
gacagcctgcggctcgaggtggcgcgggaggaggcggtcgtccgccaggcggtcagggac
ctggacaccgtcctggcgcagcacgggcccgagatggtccgctggatcgaggcgcagccg
ccccgctccggtggcgaccggcccgccgccgtgaccctgcgggcggccccggtgcacgtg
gggccgctcctccgggagctcctgtgggaccgggtgcgctcggccgtcctgacgtccgcg
accctcacggtgggcggccggttcgatcacgtgctcgagcgtctcggcctggacgcgctg
ccggaagggcggctggcgctcgcacaggtgccctcgcccttccggtacggcgagcaggcc
ctcgtgctcatccccgaagacatcccgacccccagggccggcgaggcggagttccaggcg
gcggcgacgcgcctcctcgccgacctgctcgtgcaggtcggcggcaggacgctggtgctg
ttcacctcccaccgccagctgcgccaggtgtacaatgaattgaaagggccgctcgaagcg
gccgggctcgtgctcctggcccagggtctcgacggcgcccgggggcgcctggtcgaggag
ttccgggccggggagcgggcggtgctgatggggtcggcctccttctgggagggggtcgac
atccccggggaggacctttcctgcgtggtcgtggtgcggctcccgttccagccgcccggc
gacccggtgatggaggcccggtcggaggacctggaagcccgggggctgtccgccttccag
cacctcagcctgccggaggcgatcatccgcttcaagcagggcttcggccggctcatccgc
acggggacggaccgcggggtcgtggtggtcctggaccgccgcatcgatccccgggaggcc
cgctacggacggcagttcctgcgctcgctcccggacccccgggtggccacggcccccgcg
gacgagatcgccacgctggcggcccgctttctccgggatccgccagggactgcggccatg
cacggcgaagcgtga

DBGET integrated database retrieval system