Caldinitratiruptor microaerophilus: caldi_13260
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Entry
caldi_13260 CDS
T08566
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cmic
Caldinitratiruptor microaerophilus
Pathway
cmic00260
Glycine, serine and threonine metabolism
cmic00460
Cyanoamino acid metabolism
cmic00630
Glyoxylate and dicarboxylate metabolism
cmic00670
One carbon pool by folate
cmic00680
Methane metabolism
cmic01100
Metabolic pathways
cmic01110
Biosynthesis of secondary metabolites
cmic01120
Microbial metabolism in diverse environments
cmic01200
Carbon metabolism
cmic01230
Biosynthesis of amino acids
cmic01240
Biosynthesis of cofactors
cmic04981
Folate transport and metabolism
Module
cmic_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
caldi_13260 (glyA)
09102 Energy metabolism
00680 Methane metabolism
caldi_13260 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
caldi_13260 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
caldi_13260 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
caldi_13260 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
caldi_13260 (glyA)
Enzymes [BR:
cmic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
caldi_13260 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
BDG60236
UniProt:
A0AA35CMS9
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All DBs
Position
complement(1343687..1344928)
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AA seq
413 aa
AA seq
DB search
MTALKDFDPEIYEAIQREEQRQREKIELIASENFVPRAVLEAMGSVLTNKYAEGYPGRRY
YGGCENVDVVEDIARERIKRVFGAEHANVQPHSGAQANMAVYHALLQPGDTVLGMNLAEG
GHLTHGSPVNFSGKLYRFVSYGLNPETERVDYDEVLRLAKAHRPRLIVAGYSAYPRVLDF
ARFREIADEVGAYLMVDMAHFAGLSATGHYPNPVPHAHVVTSTTHKTLRGPRGGLILCKA
ELAKPIDSAVFPGTQGGPLMHVIAAKAVAFKQLLEPSFRDYSERIVRNARALADGLLRRG
FRLVTGGTDNHLMLVNLIPMGLTGRDVEKLLDRVGITVNKNAVPRDPQKPMVTSGIRIGT
PAVTTRGMREAEMDRIAELIATAIEHRGDEARLQQVAAEVRELTARFPLVEGE
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgctcaaggacttcgacccggagatctacgaggcgattcaaagggaagagcag
cggcagcgggagaagatcgagctgatcgcctccgagaacttcgtgccacgggccgtgctc
gaggcgatgggctcggtgctcaccaacaagtacgcggagggttaccccggccggcgctac
tacggcggctgcgagaacgtcgacgtggtggaggacatcgcccgggagcgcatcaagcgg
gtcttcggggccgaacacgccaacgtccagccccactccggcgcccaggcgaacatggcc
gtctatcacgccctcctgcagcccggcgacacggtcctgggcatgaacctggcggagggc
ggccacctcacccacggctcccccgtgaacttctccggcaagctgtaccgcttcgtctcg
tacgggctcaaccccgagacggagcgggtcgactacgacgaggtcctgcggctggcgaag
gcgcaccggccccggctgatcgtggcgggatactcggcctacccgcgggtgctcgacttc
gcccggttccgggagatcgccgacgaggtgggcgcctacctgatggtggacatggcccac
ttcgccggactgtcggccacgggccactaccccaacccggtgcctcacgcccacgtggtc
acgtcgaccacccacaagacgctgcggggcccccggggcgggctgatcctctgcaaggcg
gagctggcgaagccgatcgacagcgcggtgttcccggggacgcagggcgggccgctcatg
cacgtgatcgccgccaaggcggtggccttcaagcagctcctggagccttcgttccgggac
tacagcgagcggatcgtccgcaacgccagggccctggccgacggcctcctgcgccgcggc
ttccgcctcgtcaccggcggcacggacaaccacctcatgctggtgaacctgatcccgatg
ggcctgaccggccgggacgtggagaagctcctggaccgtgtgggcatcacggtgaacaag
aacgcggtgccccgggacccacagaagcccatggtcacctcggggatccgcatcgggacg
ccggcggtcaccacgcgggggatgcgcgaggccgagatggatcgcatcgcagagctcatc
gcgaccgcgatcgagcaccggggcgacgaggcccggctgcagcaggttgccgcggaggtc
cgggagctcacggcccgcttccccctggtcgaaggggagtga
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