Caldinitratiruptor microaerophilus: caldi_14560
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Entry
caldi_14560 CDS
T08566
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cmic
Caldinitratiruptor microaerophilus
Pathway
cmic00521
Streptomycin biosynthesis
cmic00523
Polyketide sugar unit biosynthesis
cmic00525
Acarbose and validamycin biosynthesis
cmic00541
Biosynthesis of various nucleotide sugars
cmic01100
Metabolic pathways
cmic01110
Biosynthesis of secondary metabolites
cmic01250
Biosynthesis of nucleotide sugars
Module
cmic_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
caldi_14560 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
caldi_14560 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
caldi_14560 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
caldi_14560 (rmlB)
00525 Acarbose and validamycin biosynthesis
caldi_14560 (rmlB)
Enzymes [BR:
cmic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
caldi_14560 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
BDG60366
UniProt:
A0AA35G7S0
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Position
complement(1448840..1449910)
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AA seq
356 aa
AA seq
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MARRILVTGGAGFIGSNFIRYVLDRHPDWRVVNLDLLTYAGNPANLRDVEGHPGYRFVHG
DIGDMGLVRALLAEEAPDAVVHFAAESHVDRSIAGPEVFVRTNVLGTQVLLEAVRQEIAR
REAVGPAVGPAGSAAARGAGPEGGRPGLLFVQVSTDEVYGSLGPTGLFTEETPLAPNSPY
SASKAGADLLVRAYHHTYGLPAIITRCSNNYGPYQYPEKLIPFFITRALADEYLPVYGDG
LNVRDWLYVEDHCAALELVLLHGRPGAVYNIGGGNERTNLEITRRILAELGKPESLIRFV
PDRPGHDRRYAMDATKIRRELGWEPRHSFEEGLRRTIDWYLTHRDWWEPLLASSPA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcgcatcctggtgacgggcggggcggggttcatcggcagcaacttcatccgg
tacgtgctggaccgtcacccggactggcgggtggtgaacctcgacctcctgacctacgcc
ggcaacccggcgaacctgcgggacgtggagggccatccggggtaccggttcgtgcacggg
gacatcggcgacatgggcctggtgcgggcgctcctggcggaggaggcgcccgacgcggtg
gtgcacttcgccgccgagtcgcacgtggaccggagcatcgccgggccggaggtgttcgtg
cgcaccaacgtgctggggacgcaggtgctgctggaggcggtgcggcaggagatcgcccgg
cgggaggcggtcggcccggcggtggggccagcgggatcggcggcggcccggggtgccggc
ccggagggcggccggccggggctccttttcgtccaggtctcgacggacgaggtgtacggg
tcgctgggcccgacgggcctcttcacggaggagacgccgctggcgccgaacagcccgtac
tcggccagcaaggcgggggcggacctgctggtgcgggcctaccaccacacgtacgggctg
ccggcgatcatcacccgctgctcgaacaactacgggccgtaccagtacccggagaagctg
atcccgttcttcatcacccgggcgctggcggacgagtacctgccggtgtacggggacggc
ctgaacgtgcgggactggctgtacgtggaggaccactgtgcggcgctggagctcgtgctg
ctgcacggccggccgggggcggtctacaacatcggcggggggaacgagcggacgaacctg
gagatcacccgccggatcctggcggagctgggcaagccggagtcgctgatccggttcgtc
ccggaccgtccggggcacgaccggcggtacgcgatggacgcgacgaagatccggcgggag
ctggggtgggagccccggcactcgttcgaggaggggctccggcggacgatcgactggtac
ctgacccaccgggactggtgggaaccgctacttgcaagttcgccagcctaa
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