| Entry |
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| Symbol |
addB
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| Name |
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
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| KO |
| K16899 | ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] |
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| Organism |
cmic Caldinitratiruptor microaerophilus
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| Brite |
KEGG Orthology (KO) [BR:cmic00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cmic03400]
caldi_15880 (addB)
Enzymes [BR:cmic01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
caldi_15880 (addB)
DNA repair and recombination proteins [BR:cmic03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
caldi_15880 (addB)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1591393..1594941)
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| AA seq |
1182 aa
MGRAGTGKTRLFLDAIEAELKRAPDGPPLILLVPEQATFQMEQALLARVPGFVRAHVLSF
RRLAWRVLTEVGGAARPAIGELGRRMVLRALLARRAGELRLFRRVAGRPGFPGRLARSLS
EMHAYGVTPDRLEAARRALEEAGAGDSPLAAKLHDLALLFADFRAYLAGRFTDPDDSLTL
LARQLPSSSLVRGAEVRVDGFQGFTPQEFAVLEALLPVARRVEVALTLDGRLLDRLDAGV
EPAPEDVFHPTAATYVRLRRIARQQGVRVEPPRVLDGGDPPVRFRAAPALAHLERAYFDP
GAVPLSGPAPEVALVTARNRRAEVEAAAREILRLVREEGYRFRDIAVIVRDLGEYHDLVA
AVFASQGIPHFVDRRRPVLHHPLVELVRSALEVVISDWAYEPVFRLLKTDLVPVPRADVD
VLENYVLEHGIRGPAWYRPEPWRFRRRFTLDEDGGPSEAEAAWLAEVNRIRDGATAALRE
LQERLGPARRAPAPVRALAEALHGFLEALGVHGQLLHWSAEADARGDPDAAQEHMQVYGG
VLELLDQVVESLGDQAMTLAEFLEVVEAGLEGLEVGLIPPGLDQVVVGSVERSRHPDLRA
AFVLGVADGVFPRAGSEDVILSDPDRDRLAELGLELGPTARQVTLEEQFRVYLALTRARE
RLWLSCPLADDRGRAVWPSSVFVRVQELLPEAPRRHMEAAGEDDPAGAATIPELAGRVAA
RLRRALEPSSAGFPATGTGPMGVSGESLEPWLKVYQWLVTDPAAAPLARPVLSSLAYRND
PPPVDPEVAGRLYGGPVIRTSVTRLESLAACPFQHFAAHGLGLRERAVFQVGPPQLGFVQ
HAALQRLAHDLERDPAGWEGLDAAEAERRIGALLDDLAPRLRGEGLVPTGLERYLMRQVR
RSLAGAVLVLAEHARRGRFRPVAVELPFGEADGLPGLAVAGPGGRQVVLRGRIDRVDAAE
GPGGRLYLRVVDYKSTARALRAAELYHGLSLQLAVYLLVALAGADRLVGAPAEPAGLLYF
PLAAAPLSGSGPVSPEEALAAWRRALRMRGVVLADPAVVRLMEAEGAGELVPARIKKDGQ
VDSRSGALPPARLRRLLRHVRGRLAGLVGQMLAGDVRIAPYRLGDATPCATCAYRAVCRL
DPRTERDRFRTLPRARDRDVWALLDDADGADPASRPDPAEEG |
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| NT seq |
3549 nt +upstreamnt +downstreamnt
gtggggcgggcgggaacgggaaagacgcggctcttcctggacgccatcgaggcggagctg
aagcgggcccccgacggcccgccgctcatcctgctggtgcccgagcaggccaccttccag
atggaacaggccctcctggcccgggtgcccggcttcgtgcgcgcacacgtcctgagcttc
cgccggctcgcatggcgtgtgctcacggaggtgggcggcgccgcccggcctgccatcggc
gaactcggccggcggatggtgctgcgcgcgctgctggcccggcgggcgggggaactccgg
ctcttccgccgcgtggccggccggcccgggttcccgggccgcctggcacgcagcctgagc
gagatgcacgcgtacggagtcacgccggaccgcctggaagccgcccggcgggccctcgag
gaggccggcgccggcgacagccccctggccgccaagctgcacgacctcgccctcctcttc
gccgacttccgggcgtacctcgccggccgcttcaccgacccggacgactcgctgaccctc
ctggcccgccagctcccctcctcgtcgctcgtccggggcgccgaggtccgggtcgacggt
tttcagggcttcaccccccaggagttcgccgtgctggaggcgctcttgccggtggcgcgc
cgggtcgaggtcgccctcacgctggacgggcgcctgctggaccggctcgacgccggtgtg
gagccggcgccggaggacgtcttccacccgaccgcggccacgtacgtgcggctgcgccgc
atcgcccggcagcagggggtccgggtcgagccgccgcgggtgctggacggcggtgaccct
cccgtgcgcttccgggccgccccggccctggcccacctcgagcgcgcgtacttcgatccc
ggggccgtgccgctcagcggtccggcgcccgaggtggccctggtcacggcacggaaccgc
cgtgccgaggtcgaggcggccgcccgcgagatcctgcggctcgtccgggaggaagggtac
cgcttccgggacatcgcggtcatcgtccgggacctgggggagtaccacgacctcgtcgct
gccgtcttcgcctcccaaggcatcccgcacttcgtcgaccggcgccggcccgtgcttcac
cacccgctggtggaactcgtccgctccgccctggaggtggtgatctcggactgggcctac
gagccggtcttccgcctgctcaagaccgacctggtccccgtgccccgggccgacgtggac
gtgctggagaactacgtgctggagcacggcatccgcgggccggcctggtaccggcccgag
ccgtggcggttccggcgccgcttcacgctcgacgaggacgggggaccgtccgaggcggag
gcggcctggctggccgaggtgaaccggatccgggacggggccacggcggccctgcgggag
ctgcaggagcggctcgggcccgcgcggcgcgcaccggcgccggtgcgcgccctggcggaa
gcccttcacggcttccttgaggcccttggcgtccacgggcagctcctccactggagtgcc
gaggccgacgcccgcggtgaccccgacgccgcccaggaacacatgcaggtgtacggcggc
gtgctggagctgctcgaccaggtggtcgagagcctcggcgaccaggcgatgaccctcgcg
gagttcctcgaggtggtggaggcgggcctggaggggctggaggtcggcctcatccccccg
gggctcgaccaggtcgtcgtggggtcggtggagcggtcccgccacccggacctgcgggcg
gcgttcgtcctcggcgtggcggacggggtgttcccccgggcggggtcggaggacgtgatc
ctgagcgaccccgaccgggaccggctcgccgagctcgggctcgagctcggccccaccgcc
cggcaggtgacgctggaggaacagttccgggtgtacctcgccctgacccgggcccgcgag
cgcctctggctgagctgccccctggccgatgaccggggccgcgcggtatggccgtcgtcg
gtgttcgtgcgggtgcaggaactcctgccggaggccccgcgccgccacatggaagcggcg
ggcgaggacgacccggccggggccgccaccatcccggagctggcggggcgggtggcggcg
cgcctgcgccgcgccctcgaaccctcgtccgcaggctttccggcaaccgggacgggcccg
atgggggtctccggcgaatccctggaaccctggctcaaggtgtaccagtggctggtcacg
gacccggccgcggcgcccctcgcgcgcccggtgctgtcgagcctcgcctaccggaacgac
ccaccgccggtagaccccgaggtggccgggcgcctgtacggggggccggtgatccgcacc
agcgtgacccgcctcgagagcctggccgcctgcccgttccagcacttcgccgcccacggg
ctggggctccgggagcgcgccgtgttccaggtggggccgccccagctggggttcgtgcag
cacgcggcgctgcagcgcctggcgcacgacctggagcgggaccccgccggctgggagggg
ctcgatgcggcggaggcggagcgccggatcggcgcgctcctggacgacctcgcgccgcgc
ctgcggggggaggggctcgtccccaccgggctcgagcgctacctcatgcggcaggtgcgc
cgctcgctcgccggggccgtcctggtgctcgccgagcacgcccgccgcgggcgcttccgc
ccggtggccgtcgagctgcccttcggggaggcggacggactgccggggctcgcggtggcg
gggccgggcggccggcaggtggtcctgcggggccggatcgaccgggtcgacgccgccgag
gggccgggcgggcgcctgtacctgcgggtggtcgactacaagagcaccgcccgcgcgctg
cgcgcggcggagctgtatcacgggctgtccctgcagctggccgtctacttgctggtcgcc
ctggccggggccgaccggctcgtgggcgcgccggccgagcccgccggcctgctgtacttc
ccgctggccgccgcgccgctctccgggtcgggcccggtgagtccggaggaggccctggcc
gcctggcgccgcgcgctgcgcatgcggggggtggtgctggcggacccggccgtggtccgg
ctcatggaggccgagggggccggggagctggtacccgcccggatcaagaaggacggccag
gtcgacagccgctccggggccctgccgcctgccaggttgcggcggctcctccgccacgtg
cgggggcgcctggccggtctggtggggcagatgctcgccggcgacgtgcggatcgccccg
taccggctgggcgatgccaccccgtgcgccacctgcgcgtaccgtgcggtgtgccggctc
gacccccgcaccgagcgcgaccggttccgcacgctcccccgcgcccgggaccgggacgtg
tgggcgctcctggacgatgcagacggggctgacccggcgagcaggccggacccggcggag
gaggggtga |
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