KEGG   Caldinitratiruptor microaerophilus: caldi_16940
Entry
caldi_16940       CDS       T08566                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
cmic  Caldinitratiruptor microaerophilus
Pathway
cmic02024  Quorum sensing
cmic03060  Protein export
cmic03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cmic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    caldi_16940
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    caldi_16940
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    caldi_16940
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cmic02044]
    caldi_16940
Enzymes [BR:cmic01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     caldi_16940
Secretion system [BR:cmic02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   caldi_16940
  Eukaryotic Sec-SRP protein
   caldi_16940
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin APS_kinase CbiA AAA_22 AAA_33 nSTAND3 AAA_25 AAA_16 AAA_18 AAA_31 ParA AAA_30 AAA_17 NACHT Thymidylate_kin ArsA_ATPase ATP_bind_1 VirC1 ParBc KTI12 6PF2K NPHP3_N
Other DBs
NCBI-ProteinID: BDG60604
UniProt: A0AA35G9S8
LinkDB
Position
complement(1702998..1704386)
AA seq 462 aa
MAVFESLSGRLQEVFRRLRGKGKLTEADVNDALREVRTALLAADVNFRVVKDFIARVRER
AVGAEVLESLTPAQQVIKIVYEELTALMGGEHAKLSVAPKPPTVILLVGLQGSGKTTHAG
KLAVHLRKQGRRPLLVAADVYRPAAVRQLQVLGEKAGVPVFQMGQQDPVAIARAGVEHAR
STGLDTVIVDTAGRLHVDDELMGELERIKAAVSPHEVLLVVDAMAGQDAVNVAEEFHRRL
GIDGIILTKLDGDQRGGAALSVRAVTGRPIKFAGTGEKLDALEPFHPERMASRILGMGDV
LTLIEKAQEAVDAEKAMALAKKLAKDQYTLEDFRDQLRQMRRLGPLEQILSMIPGLGRLR
ELQDLKVDEKELARVEAIINSMTVQERRHPEIIDGSRRRRIAAGSGTRVADVNRLLRQFE
DTRRLMKQMSSMERTLARRGGKGPRLPGLGPGLPPGFPPGRR
NT seq 1389 nt   +upstreamnt  +downstreamnt
gtggcggtcttcgagagcctgtccggccggctgcaggaggtcttccgccggctgaggggc
aagggcaagctgacggaggccgacgtgaacgacgccctccgggaggtccggactgccctc
ctggctgccgacgtgaacttccgggtggtgaaggacttcatcgcccgggtccgggagcgg
gcggtcggcgccgaggtgctcgagagcctcacgcccgcgcagcaggtcatcaagatcgtc
tacgaggagctcaccgccctcatgggcggcgagcacgccaagctgtcggtggccccgaag
ccgcccaccgtgatcctcctggtggggcttcaggggtcgggcaagaccacccacgccgga
aagctcgccgtccacctcaggaagcagggccgcaggccgctcctggtggcggccgacgtg
taccggcccgccgccgtccgccagctgcaggtgctgggggagaaggccggcgtaccggtc
ttccagatggggcagcaggaccccgtggccatcgcccgggccggggtggagcacgcccgc
agcaccggcctcgacacggtgatcgtggacaccgccgggcggctgcacgtcgacgacgag
ctcatgggcgaactcgagcgcatcaaggccgccgtctccccgcacgaggtcctcctggtg
gtcgacgcgatggccggccaggacgccgtcaacgtggcggaggagttccaccgccggctg
ggcatcgacgggatcatcctcaccaagctcgacggcgaccagcggggcggggcggcgctc
agcgtccgggccgtgaccggccggcccatcaagttcgccggcacgggggagaagctggac
gccctggagcccttccacccggagcgcatggcctcccgcatcctgggcatgggggatgtc
ctcaccctcatcgagaaggcccaggaggcggtggacgccgagaaggccatggccctggcg
aagaagctggcgaaggaccagtacaccctggaggacttccgggaccagctccggcagatg
cggcggctgggcccgctggagcagatcctgtcgatgatcccgggtctgggccggctgcgc
gagctccaggacctgaaggtcgacgagaaggagctggcccgggtggaggccatcatcaac
tcgatgaccgtgcaggagcggcgccacccggagatcatcgacggcagccggcgccggcgc
atcgccgccgggtcgggtacccgggtggccgacgtcaaccggctcctgcgccagttcgag
gatacccggcgcctcatgaagcagatgagcagcatggaaaggaccctggcacggcgtggc
ggcaaggggccgcgcctgccgggccttgggcccgggctccccccgggctttccgccgggg
cgccgctag

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