Caldinitratiruptor microaerophilus: caldi_16990
Help
Entry
caldi_16990 CDS
T08566
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cmic
Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmic03019
]
caldi_16990 (rnc)
03009 Ribosome biogenesis [BR:
cmic03009
]
caldi_16990 (rnc)
03036 Chromosome and associated proteins [BR:
cmic03036
]
caldi_16990 (rnc)
Enzymes [BR:
cmic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
caldi_16990 (rnc)
Messenger RNA biogenesis [BR:
cmic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
caldi_16990 (rnc)
Ribosome biogenesis [BR:
cmic03009
]
Eukaryotic type
90S particles
RNase
caldi_16990 (rnc)
Prokaryotic type
rRNA processing factors
caldi_16990 (rnc)
Chromosome and associated proteins [BR:
cmic03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
caldi_16990 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DUF6329
Motif
Other DBs
NCBI-ProteinID:
BDG60609
UniProt:
A0AA35CLA1
LinkDB
All DBs
Position
complement(1710197..1710928)
Genome browser
AA seq
243 aa
AA seq
DB search
MADEAELVEWAERVLGHRFRQPELLVEALTHPTYAYEVGGPSNQRLEFLGDAVLSLVISR
YLYERYPDWPEGTLSRVRAALVSAPTLAASARALGVGQVLQLGKGEERMGGRDRESNLAD
ALEALVAAVYVDGGLQAAADLVVAQLAPQVEAARTGRLHPNHKAQLLEWAQRRTGRPPHY
QVVAEEGPTHARRFRVRVFVGGQAAGEGEGSSKRAAEQEAAREALLRLRGRSDGAEPRSD
ENL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagcggagctcgtcgagtgggcggagcgggtgctgggccaccggttccgg
cagccggaactgctggtcgaggcgctcacccaccccacctacgcgtacgaggtggggggc
ccctcgaaccagcggctcgagttcctgggagacgcggtgctctccctggtcatcagccgc
tacctctacgagcggtaccccgactggccggaggggacgctgagccgggtgcgggcggcc
ctcgtgtcggcgcccaccctggcggcgtccgcgcgcgccctgggggtcgggcaagtgctg
cagctgggcaagggcgaggagcggatggggggccgcgaccgcgagtcgaacctggcggat
gccctcgaggccctggtggcggccgtgtacgtggacggcggcctgcaggcggccgccgat
ctcgtcgtggcgcaactcgcaccgcaggtggaggcggcccgcaccgggcgcctgcacccc
aaccacaaggcgcagctgctggagtgggcgcagcgccgcacggggcgcccgccgcactac
caggtggtggcggaggaaggccccacccacgcgcggcggttccgggtgcgcgtgttcgtg
ggcggacaggcggcgggggagggcgaggggagctcgaagcgggcggccgaacaggaggcc
gcccgcgaggcgctgctccggttgcggggccggtcggacggggcggagccgcgttccgat
gagaacttatga
DBGET
integrated database retrieval system
