Caldinitratiruptor microaerophilus: caldi_17340
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Entry
caldi_17340 CDS
T08566
Symbol
birA
Name
(GenBank) bifunctional ligase/repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
cmic
Caldinitratiruptor microaerophilus
Pathway
cmic00780
Biotin metabolism
cmic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
caldi_17340 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmic03000
]
caldi_17340 (birA)
Enzymes [BR:
cmic01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
caldi_17340 (birA)
Transcription factors [BR:
cmic03000
]
Prokaryotic type
Helix-turn-helix
Other families
caldi_17340 (birA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
HTH_20
HTH_AsnC-type
MarR_2
HTH_IclR
HTH_Crp_2
HTH_5
HTH_31
Rrf2
LexA_DNA_bind
MarR
HTH_36
YdaS_toxin
HTH_10
Fe_dep_repress
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
BDG60644
UniProt:
A0AA35CJV3
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Position
complement(1739740..1740729)
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AA seq
329 aa
AA seq
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MRARILEILRENRGRPVSGEELARALGLSRTSVWKHVTALRRAGYPIEGSPRRGYVLESV
PDLLTAEEIRSGLATEVLGRQVEVRQSVSSTNDLAKERARRGAPEGLVVVAEEQTAGRGR
LGRAWASPPGVGLWMSVLLRPPLPAPEVARLTLAAAVAVAEAVRAVSDVPCGIKWPNDVV
AGGRKLCGILTEIEADWERVHFVVVGIGVNVNTPAAAFPPEIRESATSIRIEQGRPAPRA
ALARAILAGLEHAYRETLAGRFDGVLARWRALSVTLGRPVRILPVAEGQPALAGVAEDVD
GDGALLLRLPDGRLHRVLAGEVSLRPADT
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgcccggatcctggagatcctgcgcgagaaccgggggcggccggtctccggcgag
gagctggcgagggccctcggcctcagccgcacctcggtgtggaagcacgtgacggcgttg
cgccgggccggctatccgatcgaagggagcccccggcgggggtacgtcctcgagtcggtg
cccgacctgctgacggcggaggagatccggagcggtctggcgaccgaggtgctgggccgg
caggtcgaggtgcggcagtcggtgtcctccacgaacgacctggcgaaggaacgggcccgc
cgcggcgcccccgaggggctcgtcgtggtggccgaggagcagacggccgggcggggccgg
ctcgggcgcgcctgggcctccccgcccggggtgggcctgtggatgtccgtgctcctgcgc
ccgcccctgccggcgcccgaggtggcgcggctcaccctggcggccgcggtggccgtggcc
gaggccgtccgggccgtctcggacgtgccgtgcgggatcaagtggccgaacgacgtggtg
gccgggggccgcaagctctgcggcatcctcacggagatcgaggcagactgggaacgggtg
cacttcgtcgtcgtgggcatcggggtgaacgtgaacacgccggcggcggcgttcccgccc
gagatccgggagagcgccacgtccatccggatcgagcagggccggcccgccccccgcgcc
gccctggcccgcgcgatcctcgccgggctcgaacacgcgtaccgggagacccttgccggg
cggttcgacggggtgctggcgcgctggcgggccctgtccgtgaccctcggccggccggtg
cggatccttcccgtggccgagggccagccggcgctcgcgggggtggccgaggacgtcgac
ggggacggcgccctgctcctccgcctgccggacggccggctccaccgggtcctggccggc
gaggtcagcctgcggccggcggacacgtga
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