Caldinitratiruptor microaerophilus: caldi_17490
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Entry
caldi_17490 CDS
T08566
Name
(GenBank) hypothetical protein
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cmic
Caldinitratiruptor microaerophilus
Pathway
cmic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
caldi_17490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmic03400
]
caldi_17490
Enzymes [BR:
cmic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
caldi_17490
DNA repair and recombination proteins [BR:
cmic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
caldi_17490
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
zf-CHY
AAA_19
UvrD-helicase
Zn_ribbon_LysW
Viral_helicase1
Zn_ribbon_Top1
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
BDG60659
UniProt:
A0AA35CJW3
LinkDB
All DBs
Position
complement(1756166..1758472)
Genome browser
AA seq
768 aa
AA seq
DB search
MAEPTAAGGGPEGAPRYARVAVDLAAAGADRLFTYSVPDPLRGRLAPGAWVSVPFGRRQI
LGCYVEPAPAAPPGVEVRPLGEIVTGLPPVPPALLDLARWVAGRYLCPLAAALRLLIPAG
ARRGEVRPRRRAALALAVGAEAAAEAAARLGSRAPRQAAVLRTLLGAGGPVPLEALERTV
GGDARGAAAALVRGGLVRRVDLPVRRDPLGPEGAVETEPASPPALTPAQAAAVAKVEEAL
AAPPPRQPVLLHGVTGSGKTEVYLEAIARVVAAGRQAIVLVPEIALTPQTVARFRARFTG
RVAVLHSALSPGERFDEWLRIRRGEVDIAVGARSAVFAPFERLGLIVVDEEHEATYKQDE
VPRYHAREVAEERARREGALVLLGSATPALETFWRAREGRVALVRLPERVRGRPLPPVEI
VDMRAELRSGRAGLFSRRLEEALGDALARGEQAILFLNRRGFHTFALCRACGEAVTCPRC
SVALTLHRPARTGAYMACHYCGHRQPPPSACPRCGSPSIRLLGSGTERVEAELARLFPRA
RVVRLDVDTTRRRGSHARILGALAQGRADVLVGTQMVTKGLDLPGVTLVGVVLADTTLRL
PDFRAAERTFQLIAQVAGRAGRGDRPGRVVVQTYQPDHFAVRTAAAHDYDSFFEQEAAWR
RLMGYPPFAEFVRLVFAGPAEAEVAASADAATRLLEAEAAAAPAEILGPVPAPLALLRGL
YRYHVVLKGPDRDGLVRAVRAALGGPPSRWRRGREVRLTVDVGPYSML
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggctgagccgaccgcggcggggggcgggccggagggcgcgccccggtacgcccgggtg
gccgtcgacctggccgcggccggggcggaccgcctcttcacctattcggtccccgacccg
ctccgtggccggctggcgccgggggcctgggtttccgtacccttcgggcgccggcagatc
ctgggctgctacgtggagccggcgccggcggctccgcccggggtggaggttcggcccctc
ggggagatcgtgaccggcctcccgccggtgcctcccgccctgctcgacctggcccgctgg
gtggccggccggtacctgtgcccgctggcggcggccctgcgcctcctcattcccgccggc
gcacgccgcggggaggtgcggccgcgccgccgcgccgcgctcgcgctggccgtcggggcg
gaagcagccgcagaggcggccgcgcggctcgggagccgggctccccgccaggcggcggtc
ctgcggacgctcctcggggccggcgggccggtgccgctcgaggcgctcgagcgcaccgtc
gggggcgacgcccggggggctgccgcggccctcgtgcggggcgggctcgtccggcgggtg
gacctccccgtgcggcgggacccgctgggcccggagggcgcggtggagacggagccggcc
tcgccgcccgccctcaccccggcgcaggcggcagcggtggcgaaggtggaggaggccctg
gccgctcccccgccccgccagccggtgctccttcacggggtgaccggctcggggaagacg
gaggtctacctggaggccatcgcccgggtcgtggcggccgggcggcaggccatcgtcctg
gtacccgagatcgccctgacgccgcagacggtggcccgcttccgggcccgcttcaccggc
cgcgtggccgtgctgcactcggccctgtccccgggcgagcgcttcgacgagtggctgcgg
atccggcgcggcgaggtcgacatcgccgtcggcgcccgctccgcggtgttcgccccgttc
gagcgcctcgggctcatcgtggtggacgaggagcacgaggcgacctacaagcaggacgag
gtgccccgctaccacgcccgcgaggtggcggaggagcgggcccggcgcgagggggcgctc
gtgctcctgggaagtgccaccccggccctggagacgttctggcgggcccgggaggggcgg
gtggccctggtccgcctgccggagcgggtgcgcgggcgcccgctgccgcccgtggagatc
gtggacatgcgggccgagctgcggtccggacgggcgggcctcttcagccggcggctcgag
gaggcgctgggcgatgcgctggcacggggggaacaggccatcctgttcctgaaccgccgg
ggctttcacacgttcgccctgtgccgggcctgcggcgaggcggtgacgtgcccccgctgc
tccgtggcgctcaccctgcaccgtccggcccgtaccggggcctacatggcgtgccactac
tgcggccaccgccagcctcctccctcggcctgcccccggtgcgggtccccctcgatccgg
ctcctgggcagcgggaccgagcgggtggaggcggaactcgcccggctcttcccccgggcg
cgcgtggtccggctcgacgtggacaccacccgccgcaggggcagccacgcccgcatcctc
ggcgcgctggcgcagggccgggccgacgtgctggtgggcacccagatggtcaccaagggg
ctggacctgccgggggtcaccctggtcggcgtggtgctggccgacaccacgttgcgcctg
cccgacttccgggcggcggagcgcaccttccagctcatcgcccaggtggcgggccgtgcc
gggcggggggatcgccccgggcgcgtggtggtccagacgtaccagccggaccacttcgcc
gtccgcaccgccgctgcccacgactacgatagcttcttcgagcaggaggcggcctggcgg
cggctgatgggatacccgccgttcgccgagttcgtccgcctggtcttcgccggccccgcg
gaggcggaagtggcggcgagcgccgatgccgcgactcggctgctcgaggcggaggccgcc
gccgcgccggccgagattctgggccccgtgccggcgcccctcgcgctcttgcggggactc
taccgctatcatgtggtgttgaaggggcccgaccgggacggtctggtgcgggccgtgcgc
gccgccctgggcggtccgccctcgcgctggcggcgcggccgggaggtgcggctcaccgtc
gacgtcgggccctactcgatgctctga
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