Caldinitratiruptor microaerophilus: caldi_18520
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Entry
caldi_18520 CDS
T08566
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cmic
Caldinitratiruptor microaerophilus
Pathway
cmic00550
Peptidoglycan biosynthesis
cmic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
caldi_18520
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cmic01011
]
caldi_18520
Peptidoglycan biosynthesis and degradation proteins [BR:
cmic01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
caldi_18520
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GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
PBP_dimer_2
Collar
Motif
Other DBs
NCBI-ProteinID:
BDG60762
UniProt:
A0AA35CND2
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All DBs
Position
complement(1867135..1869285)
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AA seq
716 aa
AA seq
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MPGPGARARRRIVFLLCLYSGAMAALTGRLAYWQFVRGEELARMGEEIRAWEMRIRAPRG
PIVDRLGRPLAETVTAEAIYARPREVKNPEAVAARLAPILGMKPEDILARLRKNTFYEYI
KRRPTEAEAAAVRGMIERGELTGVGLEPEARRLYPEGTLAAHVLGFAGIDMQGLEGLELY
YDKYLRGKNGQVRTEVDARGFEIAGGQTSIDPPQPGLTMVLTLDKALQVILEEAADRTVD
VTHAKRAALIVMDVKTGGILAMASRPAYDPNHFAASDPATRRMWLVTDAVSPGSIFKPVT
AAAALEEGVITLSTPFYDSGRITVMGETISNWNFRGFGAGTLADVMRTSSNVGFATIGLK
LGREKFYKWLEAFNLTRRTGIDLPGETVGQRPPFARATDLDLAIMAFGQTLTVTPIQMLA
ALNAIANDGRWVQPHLLKEFRTPDGQVAEVFQPASRQILSPETAREVQRLMVEVVTNGTG
RQAAVPGYNVAGKTGTAEKFEGGRKLDRYIASFAGFAPVPDPQVSVLVMIDEPEGLTYGG
QVAAPVFSQIIGDILRYLSIPPQRAPGGPEASPPVPVPNLVNLSPEEARKVAGEAGFGIL
LEGSGALVTGQFPPAGALVTRGTVLRARAEPELPPPGDGEVRVPDLRGRTLREAADLLAG
MELYVTAEGSGTVVRQEPAAGSAVPRRARIRIWLEPPAGPARVSAPGPGPASRPST
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgcctggaccaggggcccgggcgcgccgccgcatcgtcttcctcctgtgcctctacagc
ggcgccatggcggcgctcacgggacgcctggcgtactggcagttcgtgcggggcgaggag
ctggcccgcatgggcgaggagatccgcgcctgggagatgcggatccgggcgccccgcggc
ccgatcgtcgaccggctcggccggccccttgcggagacggtgacggccgaggccatctac
gcccgtccccgtgaggtgaagaacccggaggcggtggcggcccgcctggcgccgatcctc
ggcatgaaaccggaggacatcctcgcccggctgcgcaagaacaccttctacgagtacatc
aagcgccggcccacggaagccgaggcggcggcggtgcggggcatgatcgagcgcggcgag
ctcacgggtgtcggcctcgagccggaggcccgacggctctaccccgaggggacgctcgcc
gcgcacgtgctcggtttcgcggggatcgacatgcaggggctcgagggcctcgagctctac
tatgacaagtacctgcggggcaagaacggacaggttcgcaccgaggtggacgccaggggc
ttcgagatcgcgggcgggcagacatccatcgacccgccgcagcccggtctcaccatggtg
ctcaccctggacaaggccctgcaggtcattctggaagaggccgccgaccgcaccgtggac
gtgacccacgccaagcgggcggccctcatcgtgatggacgtgaagacgggtgggatcctg
gccatggccagccgcccggcgtacgacccgaaccacttcgccgcctccgaccccgccacc
cggcggatgtggctcgtcaccgacgcggtctccccgggctcgatcttcaagcctgtcacc
gcggccgccgccctggaggagggggtgatcaccctttccacgcccttttacgacagcggg
cggatcacggtgatgggggagacgatcagcaactggaacttccgggggttcggcgccggc
accctggccgacgtgatgcggacctcgtccaacgtggggttcgccacgatcggcctaaag
ctcggcagggagaagttctacaagtggctcgaggccttcaacctcacccgccgcacgggg
atcgacctgccgggggagaccgtgggccagcgtccgcccttcgcccgggccacggacctc
gacctggcgatcatggccttcgggcagacgctcaccgtgacgccgatccagatgctggcg
gccctcaacgccatcgcgaatgacggccgctgggtgcagccgcacctcctgaaggagttc
cgcacccccgacgggcaggttgcggaggtcttccagcccgccagccgccagatcctctcc
ccggagaccgcgcgggaagtgcagcgcctcatggtggaggtcgtcacgaacggcaccggc
cggcaggccgccgtgcccggctacaacgtggccgggaagaccggcacggccgagaagttc
gagggcgggcgcaagctcgaccgctacatcgcctcgttcgccggcttcgcgccggtaccg
gacccccaggtctccgtgctcgtgatgatcgacgagccggagggtctcacctacggcggc
caggtggcggcgccggtgttcagccagatcatcggcgacatcctgcgctacctgagcatc
ccgccccagcgcgcgccgggcggccccgaggcctctccacccgtccccgtccccaacctc
gtcaacctgtcaccggaagaagcccgcaaggtggccggcgaagccgggttcggcatcctg
ctggaaggttccggagccctggtcaccgggcagttccctccggccggcgccctcgtgacg
cgggggaccgtcctccgggcccgcgccgagccggagctgccgccgcccggggacggggag
gtccgggtgccggacctccgcggccgcaccctgcgggaggcggccgacctcctggcaggc
atggagctctacgtgaccgccgagggcagcggcaccgtggtgcgccaggagccggcggcg
gggagcgcggtgccccgccgggcgagaatccggatctggctcgaaccccctgcgggtccc
gcgcgggtctcggcacccgggccgggcccggcgtcccgtccgtcgacgtaa
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