Caldinitratiruptor microaerophilus: caldi_18940
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Entry
caldi_18940 CDS
T08566
Name
(GenBank) RNA polymerase sigma factor SigI
KO
K03093
RNA polymerase sigma-I factor
Organism
cmic
Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmic03021
]
caldi_18940
Transcription machinery [BR:
cmic03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
caldi_18940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
HTH_16
Histone_HNS_N
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
BDG60804
UniProt:
A0AA35CLN6
LinkDB
All DBs
Position
complement(1912879..1913679)
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AA seq
266 aa
AA seq
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MPGFLAGLWALLGGRGGPSPPQDDPIERARAGDPAAREQVLRQYTPLVLRVGAQVTGRYL
QAGRDEEVSVGLMALDEAIDRYTPGRGTSFLTFAEVVIRRRLIDHLRRARRRPEVPLSSL
APPGEEESSLPGVDERAAVLQHRADEEAAERREEIERLSRRLLEFGIRFEDLVRESPRHE
DARQRAIACARLLAEDPDLREHLLLRKELPLRQLAGRAPVSRKTLERQRRYIVAVAIILL
EEYDYLRSYIRPALVPAGSDPDGRGS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
ttgcccggcttcctcgcggggctgtgggccctactgggcggccgcggcggcccctccccg
ccgcaggacgaccccatcgaacgggcgcgggccggcgaccccgcggcccgggagcaggtg
cttcggcagtacacgcccctggtgctgcgcgtcggggcacaggtcacggggcggtacctg
caggccggccgggacgaggaagtgagcgtcggcctcatggccctggacgaggcgatcgac
cggtacacgccggggcgcggaacctcgttcctcacgttcgccgaggtcgtgatccggcgc
cggctcatcgaccacctgcgccgtgcccggcggcgccccgaggtaccgctgtcgagcctc
gcgccgccgggcgaggaggagtcctccctccccggggtcgacgagcgggcggcggtcctc
cagcaccgggcggacgaggaggcggccgagcggcgggaggagatcgagcgcctcagccgg
cgactgctcgagttcgggatccgcttcgaggacctggtgcgcgagtcgccccggcacgag
gacgcccgccagcgggccatcgcctgcgcccggctgctggccgaggacccggacttgcgg
gagcacctgctcctgcgcaaggagttgcccctccggcaactcgccgggcgcgccccggtg
agccgcaagaccctggagcgccagcggcggtacatcgtggcggtggcgatcatcctcctc
gaagagtacgactacctccggagctacatccgccccgcgctcgtaccggccggcagcgat
ccggacggccggggttcgtga
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