Caldinitratiruptor microaerophilus: caldi_20850
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Entry
caldi_20850 CDS
T08566
Name
(GenBank) ATPase AAA
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cmic
Caldinitratiruptor microaerophilus
Pathway
cmic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
caldi_20850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmic03019
]
caldi_20850
03009 Ribosome biogenesis [BR:
cmic03009
]
caldi_20850
04131 Membrane trafficking [BR:
cmic04131
]
caldi_20850
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmic04147
]
caldi_20850
Messenger RNA biogenesis [BR:
cmic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
caldi_20850
Ribosome biogenesis [BR:
cmic03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
caldi_20850
Membrane trafficking [BR:
cmic04131
]
SNARE
SNARE associated proteins
Others
caldi_20850
Autophagy
Aggrephagy
Other aggrephagy associated proteins
caldi_20850
Exosome [BR:
cmic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
caldi_20850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
AAA_22
RuvB_N
AAA_5
TIP49
CDC48_2
AAA_33
AAA_28
AAA_2
AAA_14
Parvo_NS1
nSTAND3
AAA_18
Mg_chelatase
IstB_IS21
Sigma54_activat
AAA_7
RNA_helicase
AAA_17
PhoH
AAA_24
AAA_lid_PRS2_C
AAA_30
TsaE
Sigma54_activ_2
Cytidylate_kin
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BDG60995
UniProt:
A0AA35G8G4
LinkDB
All DBs
Position
complement(2126788..2128980)
Genome browser
AA seq
730 aa
AA seq
DB search
MEEPETGRRSLRLRVAEALPEDLHRGIARLGVAEMTYLGLSPGEVVQIAGLRATVARALP
ADSGTPPRTLRIDGTTRQNSGVGLDEEVTVQRIGVSPARAVVLTPSDPGGIAHGEDPVPL
LHRRLLGCAVVAGDVVAVPRFGGEPLLFTVTGTAPRGAVLVQEGTRIRIAAVDVEPPRAG
AVTYEDVGGLDRELARVRELVELPLKYPALFRRLGVRPPRGVLLYGPPGTGKTLIARAIA
ADSRLHFVHVDGPAIMRKYYGESEARLREVFDEARRHAPSVIFLDELDALAPRREAVHGD
VEKRVVGQLLALMDGLEERGDVIVVGATNIPELLDPALRRPGRFDREIPIPVPDRDGRLA
ILRIHTRGMALAADVDLEELADVTHGFVGADLAALCREAGMAALRRLLPEIRLDPEAGAD
SGGIQVTMADFRHALGEVEPSATRELVLERPRETWEHVGGLSQIRTRLRVLVERPLRYGD
LLAGFGLHLPRGILFTGPAGTGKTLVARALASSVRANFIGVEGPSLFRKWMGETEKALRD
LFRKARQASPCILFIDELDALAPARGAAGATEAGERAVSQLLAEMDGIREHPGVLVIAAT
NRPDRLEPALLRPGRFDYILEFPLPDVAEREEILAVHTRRLPLAGDVDLGALAEATAGWS
GAELRALCQRAALLAADEWFEEAEGAGGRPPAAPGTAPAPRVGARHFRLALAEMEGGSGG
MPPPRRVEAR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtggaggagcccgagacgggccggcggagcctccgcctgcgcgtcgccgaagccctgcct
gaggacctccaccggggcatcgcccgcctgggagtagccgagatgacgtacctgggcctg
agccccggcgaggtcgtgcagatcgcggggttgcgggcgacggtcgcccgggcgctgccc
gccgactccggcacgccgccccgcacgctccggatcgacggcacgacgcgccagaactcc
ggggtcggactcgacgaggaggtcacggtccagcgcatcggggtgagcccggcgcgggcg
gtggtcctgaccccgtcggaccccggtgggatcgcccacggagaggaccccgtgccgctc
ctccaccgccgtctcctgggctgcgcggtggtggccggggacgtggtggcggtcccgcgg
ttcggcggggagccgctcctcttcacggtgaccggcacggccccgcgcggggcggtgctt
gtccaggagggcacgcggatccgcatcgcggcggtcgacgtggagccgccgcgggcgggc
gcggtcacctacgaggacgtgggcgggctcgaccgcgagctggcccgggtgcgcgagctc
gtggagcttccgctcaagtaccccgcgctgttccgccggctcggcgtgcggccgccccgg
ggcgtcctcctctacggcccgccggggaccggcaagaccctcatcgcccgggccatcgcc
gccgacagccggctgcacttcgtccacgtcgacggccccgcgatcatgcgcaagtactac
ggcgagagcgaggcccggctgcgggaggtattcgacgaggcgcgccggcacgcccccagc
gtgatcttcctcgacgaactcgacgcgctggccccccggcgcgaggcggtccacggtgac
gtggaaaagcgcgtcgtggggcagctgctcgcgctcatggacgggctggaggagcgcggg
gacgtcatcgtcgtgggcgccacgaacatcccggagctgctcgatccggcgctgcggcgc
cccggccggttcgaccgggagatccccatcccggtgccggatcgcgacggccgcctggcc
atcctccgcatccacacgcgcggcatggccctggctgcggatgtcgacctcgaggaactg
gcggacgtgacccacggcttcgtgggcgccgacctcgcggcgctctgccgcgaggccggc
atggcggcgctgaggcgcctgctgccggagatccggctggaccccgaggcgggcgccgat
tccggcgggatccaggtgaccatggccgacttccggcacgccctgggcgaggtggagccg
agcgccacgcgggagctggtgctggagcggccgcgggagacctgggagcacgtgggcggg
ctcagccagatccggacccgcctccgggtgctcgtggagcgtcccctgcggtacggtgac
ctgctggcgggattcggcctccacctgccccggggcatcctcttcaccggccccgcgggg
accggcaagacgctggtggcgcgggccctggcctcgagcgtgcgggcgaacttcatcggg
gtcgaaggcccatccctcttccgcaagtggatgggcgaaacggagaaggcgctgcgggac
ctgttccgcaaggcgcgccaggcgtcaccctgcattctgttcatcgacgaactcgacgcc
ctggccccggcccggggcgcagccggcgccaccgaggcgggcgagcgcgcggtcagccag
ctcctggccgagatggacgggatccgggagcaccccggcgtcctggtgatcgccgcgacg
aaccggccggatcgcctggagcccgccctgctgcgaccgggccggttcgactacatcctg
gagttcccgctgccggacgtggccgagcgggaggagatcctcgcggtgcacacccgccgg
ctgccgctggccggggacgtggacctgggggcgctcgcggaggccaccgcgggctggtcc
ggtgccgaactgcgtgcgctctgccagcgggccgctctcctggcggccgacgagtggttc
gaggaagcggagggagcaggcggccggccgccggcagcgccggggacggcccctgccccc
cgcgtcggcgcccgccacttccggttggcgctggcggagatggaaggaggtagcggaggg
atgccgccgccgcgacgcgtggaagcacgctga
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