Caldinitratiruptor microaerophilus: caldi_29680
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Entry
caldi_29680 CDS
T08566
Name
(GenBank) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cmic
Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmic03032
]
caldi_29680
03400 DNA repair and recombination proteins [BR:
cmic03400
]
caldi_29680
Enzymes [BR:
cmic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
caldi_29680
DNA replication proteins [BR:
cmic03032
]
Prokaryotic type
DNA Topoisomerases
caldi_29680
DNA repair and recombination proteins [BR:
cmic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
caldi_29680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
LAGLIDADG_3
Intein_splicing
LAGLIDADG_WhiA
Motif
Other DBs
NCBI-ProteinID:
BDG61878
UniProt:
A0AA35G9V7
LinkDB
All DBs
Position
3028578..3032339
Genome browser
AA seq
1253 aa
AA seq
DB search
MSIEQPQNILRTDIEQEVKKSFITYAMSVIVSRALPDVRDGLKPVQRRILYAMNEAGNTA
DRPYRKSAKTVGDVMGNYHPHGDMAIYDALVRMAQDWNLRVPLIDGQGNFGSIDGDPPAA
MRYCVTGDTLVVTDQGLVRIDRLSPDGREDVSIRVLSARGVVNTASKWFDSGRWPTRRVV
TRYGYEVTGTTNHPLLCWVQGEDGTPDLVWKTIAQIRPGDWLVLDRSEALWPQDPVDITG
LHPELPPGSRVERHELPARLDKDLAFLLGALVAEGTVRDQVIEFTNVPGPFAEAFQEAWL
RVFPTCRLHVFLREAVGYGRKPFYQMQVVSRQVVTFLRGLGLGGRSAQREIPPAVLQSPQ
PVAAAFLRGLFEGDGAVERSGRAMLRASLVSASRTLLRQVQTLLLRFGIVSMLRRDESRG
TYRLLLVGRRNLQAFAEKIGFVSPAKQEALAQALRTYSGRALSRTDFIPFLSDFVRTRAG
RGEREWLSRHNFDRPDRLAEALPRLSRVMAAADLDWIRELAQGTYFFDQVIAVEDAGEHT
VYSIRVDSACHSFVANGFVNHNTEARLSRIAGEMLRDIDKDTVDFVDNYDNSLREPVVLP
SRFPNLLVNGSSGIAVGMATNIPPHNLGEVIDALFAMIDRPQITSEELMAYVKGPDFPTG
ALILGRDEIRKAYTTGRGSITLRARAHIEVDRRDRSRILITELPYMVNKAKLIARIAELV
REHKIEGITDLRDESDRTGLRIAIEVRRDASARVILNLLYKHTPLQTTFPVHMLALVDGR
PRTLNLRDALWHYLQHQKDVIVRRSRFDLKKAEDRAHIVEGLLKALDVIDEVIRTIRESP
DTDTARTRLMQRFGFTEVQAQHILDMQLRRLTALERNKLEEEYQELQDRIAYLRAVLASE
SLQYKIIRQELAEIKEKYADERRTRIVDESGELDVEDLVAQEDIVVTLTHLGYVKRMPVT
TYRSQRRGGRGITGATTREEDFVEHLFITTTHHSLMFFTDRGRCFRLKAHEIPEASRTAR
GTALINLINLEPGEKIQAVIPIRDAEGEGFLFFATRQGYVKKTPLAEYANVRSSGLIAIR
LEEGDGVVGVRRTTGQQEIILVSSAGYALRFHEDDVRPMGRDARGVKGIELDEGAAVIGM
DVVQPDADLLVATRMAMGKRTPLAEYPTYRRGARGVKTFNLTARTGDLVAIKTVREQSEL
FLITERGILIRMPAAQVRQTGRIAQGVILMNLEPGDSLVAVAEALTRDDEDGE
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatcgagcagccccagaacatcctcaggaccgacatcgagcaggaggtcaagaag
tcgttcatcacctacgcgatgtcggtcatcgtgagccgcgccctgcccgacgtgcgggac
ggcctgaagcccgtgcagcgccggatcctctacgccatgaacgaggccggcaacacggcc
gaccggccgtaccgcaagtcggcgaagaccgtgggcgacgtgatgggcaactaccacccg
cacggcgacatggccatctacgacgccctggtccgcatggcgcaggactggaacctgcgg
gtcccgctcatcgacgggcagggcaatttcggcagcatcgacggcgacccgcccgcggcg
atgcggtactgcgtgaccggtgacaccctggtggtcaccgaccagggcctggtgcgcatc
gaccgcctgtcgccggacgggcgcgaagacgtctccatccgcgtgctgtcggcgcgcggc
gtcgtcaacacggcgagcaagtggttcgactcgggccgctggcccacacgacgggtcgtc
acgcggtacggatacgaggtcacgggtacgacgaatcaccccctcctgtgctgggtgcag
ggggaggatgggacgcccgacctcgtctggaagaccatcgcccagatccggcccggggac
tggctcgtgctggaccgcagcgaggcgctctggccgcaggaccccgtcgacatcacgggc
ttgcaccccgaactgccgccgggctcccgggtagagcgccacgaactgcccgcgcgcctg
gacaaggacctggcgttcctgctgggcgccctcgtggcggagggcaccgtgcgtgatcag
gtcatcgagttcaccaacgtgccggggccctttgccgaggccttccaggaggcgtggctc
cgggtcttcccgacctgccggctgcacgtgttcctgcgcgaggcggtcggctacggccgc
aagccgttctaccagatgcaggtggtgagccggcaggtcgtcaccttcctccgcggtctg
ggcctcggcgggcggtccgcccagcgcgagatcccgccggcggtgctccagtcgccccag
ccggtggccgctgccttcctgcgcggtctcttcgagggcgacggggcggtggagcgctcg
ggccgcgcgatgctacgcgcctccctcgtctcggcaagccgcacgctcctccggcaggtc
cagaccctcctgctccggttcggcatcgtatccatgctgcggcgggacgagagccggggc
acgtaccgcctcctgctcgttggccggcgtaacctgcaggccttcgcggaaaagatcggc
ttcgtgtcgcccgccaagcaggaagccctggcgcaagctctgaggacgtactcaggccgt
gcgctctcgcggacggacttcatccctttcctgtccgacttcgttcggacgcgggcgggc
cgcggcgagcgtgagtggctgtccaggcacaacttcgaccggccggaccggctcgctgaa
gccctgccgcgcctcagccgggtcatggccgccgccgacctggactggatccgggagttg
gcgcagggcacttacttcttcgaccaggtgatcgcggtcgaggacgcgggcgagcacacc
gtgtactcgatccgcgtcgacagcgcctgccactccttcgtcgcgaacgggttcgtcaac
cacaacaccgaggcccgcctctcccggatcgccggcgagatgctgcgggacatcgacaag
gacaccgtcgacttcgtcgacaactacgacaacagcctccgggagccggtggtgctgccg
tcccggttcccgaacctcctggtcaacggctcctccggcatcgccgtcggcatggcgacc
aacatcccgccgcacaacctcggcgaggtgatcgacgcgctctttgccatgatcgaccgc
ccccagatcacgtccgaggagctcatggcctacgtgaaggggcccgacttcccgaccggc
gccctcatcctgggccgggacgagatccgcaaggcgtacacgaccggccgcggctcgatc
acgctgcgcgccagggcgcacatcgaggtcgaccgccgcgaccgcagccggatcctcatc
accgagcttccctacatggtgaacaaggcgaagctcatcgcccgcatcgccgagctcgtg
cgggagcacaagatcgagggcatcaccgacctgcgggacgagtcggaccggacggggctg
cggatcgccatcgaggtgcgccgggacgcgagcgcccgggtgatcctgaacctcctctac
aagcacacgccgctccagacgaccttccccgtccacatgctggcgctggtcgacggccgg
ccccgcaccctgaacctgcgcgacgcgctctggcactacctgcagcaccagaaggacgtc
atcgtccgccggtcccggttcgacctcaagaaggccgaggaccgggcccacatcgtcgag
gggctcctcaaggcgctggacgtgatcgacgaggtgatccggacgatccgggagagcccg
gacacggacaccgcccggacccgcctgatgcagcggttcgggttcaccgaggtgcaggcg
cagcacatcctcgacatgcagctgcgccggctgaccgcgctcgagcggaacaagctggag
gaggagtaccaggagctgcaggaccggatcgcctacctgcgggcggtgctggccagcgag
tcgctgcagtacaagatcatccgccaggagctggcggagatcaaggagaagtacgccgac
gagcggcgaacccgcatcgtcgacgagtccggggaactcgacgtcgaggacctggtggcc
caggaggacatcgttgtcaccctcacccacctggggtacgtcaagcggatgccggtgacg
acctaccggagccagcgccggggcgggcgggggatcaccggggcgacgacccgggaggag
gacttcgtcgagcacctcttcatcacgaccacccaccacagcctcatgttcttcaccgac
cgcggccgctgcttccgcctgaaggcccacgagatcccggaggcgagccgaacggcccgc
ggcacggcgctcatcaacctcatcaacctcgagccgggcgagaagatccaggccgtgatc
ccgatccgcgacgcggagggggaggggttcctcttcttcgccacccgtcagggctacgtg
aagaagaccccgctggcggagtacgccaacgtccgctcctcggggctcatcgccatccgc
ctcgaggagggcgacggggtggtgggggtccggcgcacgacgggccagcaggagatcatc
ctcgtctcctccgccggctacgcgctccgcttccacgaggacgacgtccggccgatgggc
cgcgacgcccggggcgtgaagggcatcgagctggatgagggggctgcggtgatcggcatg
gacgtggtccagccggacgccgacctcctggtggccacccgcatggccatgggcaagcgg
accccgctggccgagtacccgacctaccgccggggcgcgcggggcgtcaagacgttcaac
ctcaccgcccgcaccggcgacctggtggccatcaagaccgtgcgtgagcagagcgagctc
ttcctcatcaccgagcgcggcatcctcatccggatgccggccgcccaggtccggcagacg
gggcgcatcgcccagggcgtgatcctcatgaacctcgagcccggggacagcctggtggcg
gtggccgaggccctcacccgggacgacgaggacggcgagtag
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