Caldinitratiruptor microaerophilus: caldi_29690
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Entry
caldi_29690 CDS
T08566
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
cmic
Caldinitratiruptor microaerophilus
Pathway
cmic00750
Vitamin B6 metabolism
cmic01100
Metabolic pathways
cmic01240
Biosynthesis of cofactors
Module
cmic_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
caldi_29690 (pdxS)
Enzymes [BR:
cmic01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
caldi_29690 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
NMO
NanE
Dus
DHO_dh
TetR_C_27
IGPS
TMP-TENI
FMN_dh
Glu_synthase
Motif
Other DBs
NCBI-ProteinID:
BDG61879
UniProt:
A0AA35GB11
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All DBs
Position
3032467..3033360
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AA seq
297 aa
AA seq
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MAMAVDKSTWRNKVGLAEMLKGGVIMDVVTPEQAIIAEKAGAVAVMALERVPADIRAQGG
VARMSDPKLIKQIMEAVTIPVMAKARIGHFVEAQILEALGVDFVDESEVLTPADEENHIW
KHDFKVPFVCGATNLGEALRRIAEGAAMIRSKGEAGTGNVVEAVRHLRSILRDIRRIKEA
PDDELQHIAKELGASLELVREVKERGRLPVPLFCAGGVATPADAALVMQLGAEAVFVGSG
IFKSGNPEKRARAIVLAVQHYNDPKILAEVSEDLGEPMVGINVSTLREEEKLATRGW
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcggtcgacaagagcacgtggcgcaacaaggtgggcctggcggagatgctc
aagggcggcgtcatcatggacgtcgtcacccccgagcaggccatcatcgcggagaaggca
ggcgcggtagcggtcatggccctggaacgcgtcccggcggacatccgcgcccagggcggc
gtggcccgcatgtccgatcccaagctcatcaagcagatcatggaggccgtgaccattccg
gtcatggcgaaggcccgcatcggccacttcgtcgaggcgcagatcctcgaggcgctcggg
gtcgacttcgtcgacgagtcggaggtgctgacccccgccgacgaggagaaccacatctgg
aagcacgacttcaaggtgcccttcgtctgcggcgccacgaacctgggcgaggccctgcgg
cgcatcgccgagggggcggcgatgatccgctccaagggcgaggccggcacgggcaacgtc
gtcgaggcggtccggcacctgcgctcgatcctccgggacatccgccgcatcaaggaggcg
ccggacgacgagctgcagcacatcgccaaggaactgggcgcctccctcgagctcgtgcgg
gaggtcaaggagcgcggccggctgccggtcccgctcttctgcgccggcggcgtggcgacc
cccgccgacgctgccctggtgatgcagctcggcgccgaggcggtgttcgtgggctcgggc
atcttcaagtccggcaacccggagaagcgggcccgggcgatcgtcctggccgtccagcac
tacaacgatccgaagatcctcgcggaggtgtcggaggacctgggcgagccgatggtcggc
atcaacgtctccaccctgcgcgaggaagagaagctcgcgacgaggggctggtga
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