Caldinitratiruptor microaerophilus: caldi_30540
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Entry
caldi_30540 CDS
T08566
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
cmic
Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmic03000
]
caldi_30540
Transcription factors [BR:
cmic03000
]
Prokaryotic type
Helix-turn-helix
IclR family
caldi_30540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
HTH_11
HTH_Crp_2
Dimerisation
TrmB
HTH_27
MarR
HTH_20
Rrf2
Fe_dep_repress
HTH_23
HTH_AsnC-type
DUF742
DUF4423
DUF5817_CT
LexA_DNA_bind
HTH_36
PCI
Motif
Other DBs
NCBI-ProteinID:
BDG61964
UniProt:
A0AA35CMB8
LinkDB
All DBs
Position
complement(3101666..3102526)
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AA seq
286 aa
AA seq
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MTTARRSAPRSTPGPAGGEQVRALHRALDILEVLAESRASVPLADLADRLGLPRSTAHRL
LATLASRGYVAQDPETGRYRIGVRAFEVGSAFTSQTRLRDVARPFMRHLQEESGETVNLA
VLDGGEAVYVDQVESTRMVRTFADTGARVPVHCTGVGKALLAGLGDSEIRRIIRSHGLPA
FTPQTITNLKTLMEDLRQGRKLGYFVDNEEREPGVRCAAAPVYDHTGRVIAALSISAPAY
RTGDASLAEMGQKVRRAALAVSQALGYRPEARRRPDGYPLDGAEPD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccgcacgccgcagcgcgccccgctcgacccccggccccgccgggggcgagcag
gtccgggccctgcaccgggccctcgacatcctggaggtcctggccgagtcgcgggccagt
gtcccgctggccgacctcgccgaccgcctcggcctgccgcgcagcacggcccaccgcctg
ctggccacgctcgccagccggggctacgtcgcccaggaccccgagaccggccgctaccgg
atcggcgtccgggccttcgaggtcggcagcgcgttcacgagccagacccgcctccgcgac
gtggcgcgcccgttcatgcgccacctgcaggaggagtcgggggagacggtgaacctcgcc
gtgctggacggcggggaggccgtctacgtcgaccaggtcgagtcgacccgcatggtccgc
accttcgcggacaccggtgcccgcgtccccgtccactgcacgggggtgggcaaggcgctc
ctggcgggcctgggcgactcggagatccggcggatcatccggagccacggcctgccggcg
ttcaccccccagaccatcacgaacctgaagaccctgatggaggacctgcggcagggcagg
aagctcggctacttcgtcgacaacgaggaacgggagcccggcgtccgctgcgccgcggct
cccgtgtacgaccacaccgggcgggtgatcgccgccctcagcatctccgctccagcctac
cgcaccggggacgccagcctggccgagatgggccagaaggtgcgccgggccgccctcgcc
gtctcgcaggcgctcgggtaccgccccgaggcgcggcgccggccggatgggtacccgctc
gacggggccgagcccgactag
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