Caldinitratiruptor microaerophilus: caldi_31090
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Entry
caldi_31090 CDS
T08566
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
cmic
Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmic03032
]
caldi_31090
03036 Chromosome and associated proteins [BR:
cmic03036
]
caldi_31090
03400 DNA repair and recombination proteins [BR:
cmic03400
]
caldi_31090
DNA replication proteins [BR:
cmic03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
caldi_31090
Chromosome and associated proteins [BR:
cmic03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
caldi_31090
DNA repair and recombination proteins [BR:
cmic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
caldi_31090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Phage_Mu_Gam
DUF2267
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BDG62019
UniProt:
A0AA35CNX2
LinkDB
All DBs
Position
3167016..3167291
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AA seq
91 aa
AA seq
DB search
MNKAELVSAVAEKAGLTKKDSEKAVNAFVESVKEALAKGDKVSLVGFGTFEVRERRPRKG
RNPQTKAEITIPGGKAPAFKAGKELKDVVSH
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaggcggagcttgtgtcggcagtcgcggagaaagcagggctcaccaaaaaggac
tccgagaaagctgtcaacgcgttcgttgagagcgtaaaggaggcacttgcgaagggcgac
aaggtctcgctggtcgggttcgggacgttcgaggtgcgggaacgccggccgcgcaagggc
cgcaacccccagacgaaggccgagatcaccatccccggcggcaaggccccagcgttcaag
gccggcaaggagctgaaggacgtcgtctcccactga
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integrated database retrieval system
