Caldinitratiruptor microaerophilus: caldi_33440
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Entry
caldi_33440 CDS
T08566
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cmic
Caldinitratiruptor microaerophilus
Brite
KEGG Orthology (KO) [BR:
cmic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmic03016
]
caldi_33440 (truA)
Enzymes [BR:
cmic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
caldi_33440 (truA)
Transfer RNA biogenesis [BR:
cmic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
caldi_33440 (truA)
Prokaryotic type
caldi_33440 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
BDG62254
UniProt:
A0AA35GBE8
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All DBs
Position
3405676..3406437
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AA seq
253 aa
AA seq
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MTRTIKLTLRYDGTAYGGFAPQPNAVTISALLREAIRRATGEVPRLAVAGRTDAGVHARG
QVVSFSTASRIPADRFPHALNAHLPHDVVAVAAEEVPPAFHARYDAVSKVYSYTIDNSPF
PDPLLRRYAWFVPQPLDLGAMRAAAALLVGRHDFAAFRSTGGAAKTSVRTLHRLEVAEVP
GAPVVGRLLRIEAEADGFLYNMVRILAGTLVEVGLGRRSLDDVRAALATGDRTRAGRTAP
PHGLCLEAVRYPE
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcggacgatcaagctgacgctgcggtacgacggcacggcgtacggcggcttcgcc
ccccagccgaacgccgtcaccatctccgccctcctgcgggaggccatccgccgggcgacg
ggggaggtgccgcggctcgccgtcgccggccgcaccgacgcgggggtgcacgcccgcggg
caggtcgtgagcttctcgaccgccagccggatcccggccgaccgcttccctcacgcgctg
aacgcccacctgccacatgacgtggtggcggtcgccgccgaggaggtgccgccggccttc
cacgcgcgatacgacgcggtctcgaaggtgtacagctacacgatcgacaacagtccgttc
cccgaccccctcctgcgccggtacgcctggttcgtgccgcagcccctcgacctgggcgcc
atgcgggccgccgcggccctgctcgtgggccggcacgacttcgccgccttccggtcgacc
gggggcgcggcgaagacgtccgtgcgcaccctgcaccggctggaggtcgccgaggtgccg
ggggcgccggtggtcgggcgcctcctgcggatcgaggcggaggcggacggcttcctctac
aacatggtccgcatcctcgccggcacactggtggaggtcgggctgggccggcggagcctc
gacgacgtccgggccgccctggcgaccggggaccggacccgggccggtcgcacggcgccc
ccgcacgggctgtgcctggaagcggtccggtacccggaatga
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