Candidatus Mikella endobia: PMARG_ME00063
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Entry
PMARG_ME00063 CDS
T04510
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cmik
Candidatus Mikella endobia
Pathway
cmik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMARG_ME00063 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmik03019
]
PMARG_ME00063 (groL)
03110 Chaperones and folding catalysts [BR:
cmik03110
]
PMARG_ME00063 (groL)
03029 Mitochondrial biogenesis [BR:
cmik03029
]
PMARG_ME00063 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmik04147
]
PMARG_ME00063 (groL)
Enzymes [BR:
cmik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PMARG_ME00063 (groL)
Messenger RNA biogenesis [BR:
cmik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PMARG_ME00063 (groL)
Chaperones and folding catalysts [BR:
cmik03110
]
Heat shock proteins
HSP60 / Chaperonin
PMARG_ME00063 (groL)
Mitochondrial biogenesis [BR:
cmik03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PMARG_ME00063 (groL)
Exosome [BR:
cmik04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PMARG_ME00063 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PMARG_ME00063 (groL)
Exosomal proteins of breast cancer cells
PMARG_ME00063 (groL)
Exosomal proteins of colorectal cancer cells
PMARG_ME00063 (groL)
Exosomal proteins of bladder cancer cells
PMARG_ME00063 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DAAP1
Motif
Other DBs
NCBI-ProteinID:
CUX95676
UniProt:
A0A143WPF8
LinkDB
All DBs
Position
I:complement(66634..68271)
Genome browser
AA seq
545 aa
AA seq
DB search
MTAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPVITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELRKLSVPCSDSKAIAQVGTISANSDETVGTLIAEAMAKVGKEGVITVEEG
SGLQDELDVVEGMQFDRGYLSPYFVNKPETGIVELDNPFILLVDKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVTAVKAPGFGDRRKAMMQDIAILTSGTV
ISEEIGLELEKSKLEDMGQAKRVVITKDTTTIIDGMGNKALISSRVAQINQQRDEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVAMKEKKSRVEDALHATRAAVEEGVVAGGGVALI
RVANSIAELRGDNEDQNVGIKVARRAMESTLRQIVANAGEEPSVIANKVKSSNGDIGYNA
ATEEYGNMIEMGILDPTKVTRSALQYAASIAGLMITTECMVTDLPKEEKPDMGSANGGMG
NGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgacagctaaagatgtaaaatttggtaatgacgctcgcgtaaaaatgcttcgcggcgta
aatgttttggctgacgcagttaaagtaaccctaggacctaaaggtcgtaatgtagtacta
gataaatctttcggtgctccagttattactaaagatggcgtttctgttgcacgggaaatt
gagctagaagataaattcgaaaacatgggcgcccaaatggtaaaagaggttgcttctaaa
gcaaatgacgcagccggagatggaactactactgcaacagtattagctcaatctattgtt
aatgaaggtcttaaagcagtggctgctggtatgaatcctatggatttaaagcgtggtatc
gacaaagctgttattgccgcagttgcagaactaagaaaactgtccgtaccttgctctgat
tcaaaagctatagctcaggttggtactatatcagctaattctgatgaaacagtgggtact
ttaatagctgaagctatggcaaaagtaggtaaagagggcgttataactgtagaagaaggt
tccggtcttcaggatgaattagacgtagttgaaggaatgcaatttgaccgtggttatctt
tctccgtattttgttaataagccagaaactggtatcgttgaattagacaatccatttatt
ttgcttgttgataaaaaaatctccaatatcagagaaatgttacctgtgctagaagctgtt
gctaaagcaggaaaaccgttgttgattattgctgaagacgttgaaggtgaagccctggct
acattagtagtaaataccatgcgtggtattgttaaagttaccgctgtaaaagctcctgga
tttggtgatcgacgtaaggctatgatgcaagatattgctatcttaacttctggtactgtt
atatctgaagaaattggtctagaactagaaaagtctaagttagaagatatggggcaagca
aaacgtgttgtgattactaaagatacaactactattatagatggtatgggtaataaagct
cttattagtagtcgtgttgcacaaatcaaccaacagcgcgatgaagctacttctgattac
gatcgggaaaaattacaagagcgtgtagctaaattagctggaggtgttgctgttattaaa
gttggtgctgcaactgaagtagcaatgaaagagaaaaaatcacgtgtagaagatgcttta
catgcaactcgcgccgcagtagaagaaggagtggtagctggaggtggtgtagcactaatt
cgcgtagctaacagtatagctgaacttcgcggtgataatgaagatcagaacgttggtatt
aaagtagcacgcagagctatggaatcaacactgcgtcagattgttgctaacgccggtgaa
gagccctcagttattgcaaataaagtaaaatctagtaatggtgatatcggttataatgct
gctacagaagagtacggtaatatgatagaaatgggaatattagatccaactaaagtaaca
cgttctgcattacagtatgctgcttctatagcaggtttaatgataaccactgaatgtatg
gttaccgacttacccaaagaagaaaaacctgatatgggaagtgcaaacggcggtatgggt
aatggcgggatgatgtaa
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