Candidatus Mikella endobia: PMARG_ME00208
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Entry
PMARG_ME00208 CDS
T04510
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cmik
Candidatus Mikella endobia
Pathway
cmik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PMARG_ME00208 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmik03400
]
PMARG_ME00208 (ruvB)
Enzymes [BR:
cmik01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PMARG_ME00208 (ruvB)
DNA repair and recombination proteins [BR:
cmik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PMARG_ME00208 (ruvB)
RecFOR pathway proteins
PMARG_ME00208 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
nSTAND3
TIP49
AAA_3
AAA_16
Mg_chelatase
AAA_14
Rad17
AAA_18
Sigma54_activ_2
NTPase_1
RNA_helicase
TsaE
AAA_17
AAA_28
Bac_DnaA
NB-ARC
ABC_tran
AAA_33
AAA_24
bpMoxR
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
CUX95900
UniProt:
A0A143WQB3
LinkDB
All DBs
Position
I:206413..207432
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AA seq
339 aa
AA seq
DB search
MIDNARLISSVAVTGDEVSDHDIRPKKLEEYIGQPQVCEQMEIFIQAAKRRGEALDHVLI
FGPPGLGKTTLANIVANELGVNLRITSGPVLEKAGDLAAMLTNLELNDVLFIDEIHRLSP
VIEEILYPAMEDYKLDIMIGEGPAARSIKVNLPPFTLVGATTRAGLITSPLRDRFGILQR
LEFYKIGDLQQIVTRSANCLKLSITKNGAREIACRSRGTPRIANRLLRRVRDFAEVRAVG
CITDDVAVNALNMLNVDTNGFDLMDRKLIMAVIDKFIGGPVGLDNLAAAIGEERETIEYV
LEPFLIQQGFIQRTPRGRIATVHAYRHFGLNKKSESNNQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatagataacgctcgactaatttctagtgtagctgtaactggagatgaagttagcgac
cacgatatacgtcctaaaaaactagaagaatatattggccagcctcaagtatgtgagcaa
atggagatatttatccaggcagctaaaagacgcggcgaggcacttgatcatgttctaatt
tttggtcctcctggtttgggtaaaactacgttagcaaatattgttgctaatgagctagga
gttaatttgcgaatcacttcaggtcccgtgctagaaaaagctggtgatttagcagctatg
ttgactaatcttgaactaaatgatgttttatttattgatgaaatccatagactgtcacca
gtaattgaggaaatactatatccggccatggaagattataaattagatattatgataggt
gaaggaccagcagctcgctctataaaagtaaatctaccaccgtttactttagtaggagct
actactagagctggcttaattacgtcgccgctgcgtgatagatttggtattttgcaacgc
ttagagttttataagataggagatttgcagcagatagtaactagaagcgccaattgtctt
aagttaagtattactaaaaacggagcacgtgaaatagcttgtcgatctcgtggtacccca
cggatagctaacagactgctgcgccgtgtccgtgacttcgcagaagtacgggctgtaggt
tgtattactgatgatgtagctgtgaatgctctaaatatgctaaatgttgataccaacggt
ttcgatttaatggatcgaaagttgataatggctgttatcgataaatttattgggggacca
gtagggttagataatcttgctgcagcgataggtgaagagcgagagactatagaatacgta
cttgagccatttttaattcaacagggtttcatacaaagaaccccgcgcgggagaattgct
actgttcatgcttatcgtcactttggtttaaataagaaatctgaaagtaacaatcagtaa
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