KEGG   Candidatus Mikella endobia: PMARG_ME00227
Entry
PMARG_ME00227     CDS       T04510                                 
Symbol
rho
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
cmik  Candidatus Mikella endobia
Pathway
cmik03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmik00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PMARG_ME00227 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmik03021]
    PMARG_ME00227 (rho)
   03019 Messenger RNA biogenesis [BR:cmik03019]
    PMARG_ME00227 (rho)
Transcription machinery [BR:cmik03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     PMARG_ME00227 (rho)
Messenger RNA biogenesis [BR:cmik03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     PMARG_ME00227 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_22 S1CSD-TOTE-2 AAA AAA_25
Other DBs
NCBI-ProteinID: CUX95930
UniProt: A0A143WQE2
LinkDB
Position
I:complement(221718..222977)
AA seq 419 aa
MNLTELKNTPVSDLVALGENMGLENLARMHKQDIIFAILKQHAKSGEDIFGDGILEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKDGERYFALLKVNEVN
YDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARILDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSINYNHYDCVLIVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIVLLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNMEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRDFPAIDY
NRSGTRKEELLTTKEELQKMWILRKILHPMSEIDAMEFLIKKLAMTKTNDEFFDMMKRS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatcttaccgaattaaaaaatacgcccgtttcagatttagttgcactaggcgagaac
atggggctagaaaacttagctcgcatgcataaacaagatattatcttcgctatactcaag
cagcatgcaaaaagtggtgaggatattttcggcgatgggatactggaaattttacaagat
ggatttggttttctcagatctagtgatagttcataccttgctggacctgatgatatctac
gtctctcctagccagatacgtcgtttcaacttgcgcactggtgacactatttctggtaaa
attcgccctcctaaagatggagaacgttactttgcactattgaaggttaatgaagttaac
tatgataagccggaaaattcccgtaacaaaattttgtttgaaaatttaacaccattgcat
gcaaattcacggttgcgtatggagcgaggcaatggatctacagaagatttaactgcacgt
attctcgacctagcttctcctataggtcgcggccagcggggactaatagtagcaccacca
aaagcaggtaaaactatgcttctgcaaaatatagctcaaagcataaactataatcattat
gattgtgttctcatagtattattgattgacgaacgtccagaagaagttacagagatgcaa
cgtctggtaaaaggagaagttattgcttcaacatttgacgagccagcttcacgtcatgtg
caagtagcggaaatggtaatagaaaaagctaaaagattagttgaacataaaaaagatgtt
atagttttactagattctattactagactagcacgtgcctataatactgtagtaccagct
tcaggaaaagtattaactggaggtgtagacgctaatgcattgcaccgtcccaaacgtttt
tttggtgcagcacgtaatatggaagaaggaggcagcctaacaattatcgctactgctctt
atcgacactggatcaaaaatggatgaagttatttatgaagagtttaaaggaactggcaac
atggaactacatctatcacgaaaaatagcagagaaacgtgattttcctgcgatcgattac
aatcgctctggcactcgtaaagaagaattactcacaactaaagaagaattgcaaaaaatg
tggatattacgtaaaattcttcatcctatgagtgaaatcgatgccatggagtttcttata
aagaagttagcgatgactaaaactaacgatgaattttttgatatgatgaaacgttcataa

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