Candidatus Mikella endobia: PMARG_ME00227
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Entry
PMARG_ME00227 CDS
T04510
Symbol
rho
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
cmik
Candidatus Mikella endobia
Pathway
cmik03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmik00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMARG_ME00227 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmik03021
]
PMARG_ME00227 (rho)
03019 Messenger RNA biogenesis [BR:
cmik03019
]
PMARG_ME00227 (rho)
Transcription machinery [BR:
cmik03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PMARG_ME00227 (rho)
Messenger RNA biogenesis [BR:
cmik03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PMARG_ME00227 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
S1CSD-TOTE-2
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CUX95930
UniProt:
A0A143WQE2
LinkDB
All DBs
Position
I:complement(221718..222977)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLVALGENMGLENLARMHKQDIIFAILKQHAKSGEDIFGDGILEILQD
GFGFLRSSDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKDGERYFALLKVNEVN
YDKPENSRNKILFENLTPLHANSRLRMERGNGSTEDLTARILDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSINYNHYDCVLIVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIVLLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNMEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRDFPAIDY
NRSGTRKEELLTTKEELQKMWILRKILHPMSEIDAMEFLIKKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaatacgcccgtttcagatttagttgcactaggcgagaac
atggggctagaaaacttagctcgcatgcataaacaagatattatcttcgctatactcaag
cagcatgcaaaaagtggtgaggatattttcggcgatgggatactggaaattttacaagat
ggatttggttttctcagatctagtgatagttcataccttgctggacctgatgatatctac
gtctctcctagccagatacgtcgtttcaacttgcgcactggtgacactatttctggtaaa
attcgccctcctaaagatggagaacgttactttgcactattgaaggttaatgaagttaac
tatgataagccggaaaattcccgtaacaaaattttgtttgaaaatttaacaccattgcat
gcaaattcacggttgcgtatggagcgaggcaatggatctacagaagatttaactgcacgt
attctcgacctagcttctcctataggtcgcggccagcggggactaatagtagcaccacca
aaagcaggtaaaactatgcttctgcaaaatatagctcaaagcataaactataatcattat
gattgtgttctcatagtattattgattgacgaacgtccagaagaagttacagagatgcaa
cgtctggtaaaaggagaagttattgcttcaacatttgacgagccagcttcacgtcatgtg
caagtagcggaaatggtaatagaaaaagctaaaagattagttgaacataaaaaagatgtt
atagttttactagattctattactagactagcacgtgcctataatactgtagtaccagct
tcaggaaaagtattaactggaggtgtagacgctaatgcattgcaccgtcccaaacgtttt
tttggtgcagcacgtaatatggaagaaggaggcagcctaacaattatcgctactgctctt
atcgacactggatcaaaaatggatgaagttatttatgaagagtttaaaggaactggcaac
atggaactacatctatcacgaaaaatagcagagaaacgtgattttcctgcgatcgattac
aatcgctctggcactcgtaaagaagaattactcacaactaaagaagaattgcaaaaaatg
tggatattacgtaaaattcttcatcctatgagtgaaatcgatgccatggagtttcttata
aagaagttagcgatgactaaaactaacgatgaattttttgatatgatgaaacgttcataa
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