Candidatus Mikella endobia: PMARG_ME00256
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Entry
PMARG_ME00256 CDS
T04510
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
cmik
Candidatus Mikella endobia
Brite
KEGG Orthology (KO) [BR:
cmik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmik03021
]
PMARG_ME00256 (rpoH)
Transcription machinery [BR:
cmik03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PMARG_ME00256 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
UCR_14kD
HTH_26
HTH_3
Motif
Other DBs
NCBI-ProteinID:
CUX95975
UniProt:
A0A143WQF7
LinkDB
All DBs
Position
I:255953..256828
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AA seq
291 aa
AA seq
DB search
MIKYMQVLAYVPQGSLESYVRTANTYPMLTAKEELELAERLHNHSDLEAAKQLILSHLRF
VIHIARNYSGYGLPQADLIQEGNIGLMKAIRRFNPQVGVRLVSFVVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQNEVEMVAKELGVTSKDVREMESRMADQDI
AFDPTPEDETSEGHTIAPLLYLQDKSSDFADSIEEDNWDNHAVDKLSIAIKALDERSRDI
IRARWLDENNKSTLQELADQYGISAERVRQLEKNAMKKIRLTIESSSNISK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatatatgcaagttttagcttatgtaccccagggtagtttagaatcctatgtc
aggactgctaatacttatcccatgttaacggcaaaagaagaactagagttagctgaaaga
ttacataatcatagtgatctagaggctgcaaagcaattaatattgtcacatttgcgcttt
gttattcatattgcacgtaattattctggctatggtctacctcaagctgatttaatacag
gaaggaaatattggtttaatgaaagcaattagacggtttaatcctcaagtaggggtgcgg
ctggtttcatttgttgttcattggattaaagcggaaattcacgaatacgtattacgcaac
tggcgtattgtaaaagtagcaactactaaagcgcagcgtaagttattctttaacctgcgt
aaaactaaacaacgattaggctggtttaatcagaacgaagtagaaatggtagccaaagag
ttgggcgtaactagcaaagatgttcgggaaatggagtcccgtatggctgatcaggatata
gcttttgatcccacaccagaagatgaaacttcagaaggacatactattgctcctctactt
tatttacaagataaatcatctgattttgctgatagcattgaagaggataattgggataat
cacgctgttgataagttaagtatagctataaaagcacttgatgagcgaagccgtgatatc
atacgtgctcgttggttagatgagaataataaaagtaccctgcaagaattagctgatcag
tatggtatttcagcagagcgtgtgcgtcaactggaaaaaaatgcaatgaagaaaatacgt
ttaactattgagtcctcatcaaatatatcaaagtaa
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