Corynebacterium minutissimum: NCTC10288_00959
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Entry
NCTC10288_00959 CDS
T05574
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cmin
Corynebacterium minutissimum
Pathway
cmin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10288_00959 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmin03019
]
NCTC10288_00959 (pnp)
03016 Transfer RNA biogenesis [BR:
cmin03016
]
NCTC10288_00959 (pnp)
Enzymes [BR:
cmin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC10288_00959 (pnp)
Messenger RNA biogenesis [BR:
cmin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC10288_00959 (pnp)
Transfer RNA biogenesis [BR:
cmin03016
]
Prokaryotic type
tRNA degradation factors
NCTC10288_00959 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
Mug135_C
OB_cyt-4
Motif
Other DBs
NCBI-ProteinID:
SQH99670
UniProt:
A0A2X4RTQ1
LinkDB
All DBs
Position
1:1041085..1043364
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AA seq
759 aa
AA seq
DB search
MSARNAKNTKHTANNTVEFAIDDDYGITEAIATLDNGDFGTRTIRFETGQLARQAGGSVT
TYLDEDTMLLSTTTASNQPREGFDFFPLTVDVEERMYAAGKIPGSFFRREGRPSTEAILA
CRLIDRPLRPTFVKGLRNEVQVVVTVLSMDPEEYYDVVAINGASASTQLSGLPVSGPVGG
VRMALIADDKHPKGQWVAFPNNEQHERALFEMVVAGRIVKKGNKDDVAIMMVEAGAGVNV
AERIKEGAPAPQESTVAEGLEAAKPFIKTLCEAQAGLAERAAKETQEFSLFPAYSEDVYE
AVEKAASKKLQKLLTIPGKQDRDDATNEYMEQVEADLLDEFDDLEEADASKQIRNAFNAV
MKDIVRNKILTEGFRIDGRGVTDLRDLGVEVDLIPRAHGSSLFERGETQILGVTTLDMLK
MEQQIDSLTPVESKRYMHHYNFPPYSTGETGRVGSPKRREIGHGALAERALLPVIPSRED
FPYAIRQVSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSGEVKGKEKFV
ALTDILGAEDAFGDMDFKVAGTSEFITALQLDTKLDGIPSHVLADALEQARDARSAILET
MAEVIEGPDEMSGLAPRITSVTIPVNKIGELIGPKGKTINTITEETGADVSIEEDGTVYV
SAATGEAAEAAIERVNSIANPQLPKVGERFLGTVVKTVAFGAFVSLTPGRDGLVHISKLG
GDERIEKVEDVVNVGDKIQVEIADIDNRGKISLVPVEED
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctagaaacgctaaaaacaccaagcacactgccaacaacaccgtcgaattcgct
atcgacgatgactatggcattaccgaagccatcgccacactggacaatggcgactttgga
acccgcaccattcgctttgagacgggccagctcgcccgtcaggccggtggttccgtaacc
acgtacctggatgaggacaccatgctcctgtccaccaccacggcttccaaccagccgcgc
gaaggtttcgacttcttcccgctgaccgtggacgtcgaggagcgcatgtacgcagcaggc
aagatcccaggctccttcttccgccgggagggccgcccctccactgaggctatcctggca
tgccgcctcattgaccgcccgttgcgtccgacctttgtgaagggcctgcgcaacgaggtt
caggttgtcgtcacggttctctccatggacccggaagagtactacgacgtggttgccatc
aatggtgcttctgcctctacccagctctccggcctgccggtctccggtcctgtgggaggt
gtgcgcatggcactcattgctgatgacaagcacccgaagggccagtgggtagccttcccg
aacaacgagcagcatgagcgcgccctgtttgagatggtcgttgccggccgcattgtcaag
aagggcaacaaggacgatgtcgccatcatgatggtggaggcaggcgccggcgtgaacgtg
gctgaacgcatcaaggaaggcgccccggcaccccaggaatccaccgtggccgagggcttg
gaagctgccaagcccttcattaagacgctgtgtgaggctcaggcaggtttggctgagcgc
gccgcgaaggagacccaggagttctcgctcttcccggcctacagcgaggatgtatacgag
gcagtggagaaggcagcctccaagaagctgcagaagctgctcaccattccgggtaagcag
gaccgtgatgatgcaacgaacgagtacatggagcaggttgaagccgatctccttgacgag
ttcgatgaccttgaggaggcggatgcctccaagcagatccgtaacgccttcaacgctgtg
atgaaggatatcgtccgtaacaagatcctcactgaaggcttccgcattgatggtcgtggt
gttactgacctgcgtgacctcggcgtggaggtggatctcatcccgcgtgcccacggctcc
tccctatttgagcgtggcgagactcagatcctaggtgtcaccaccctggacatgctcaag
atggagcagcagattgactccctgaccccggtggagtccaagcgctacatgcaccactac
aacttcccgccatactccacgggtgagaccggccgcgtgggttccccgaagcgccgcgag
attggtcatggtgcgctggctgagcgtgctttgctgccggttatcccgtcccgtgaggac
ttcccgtacgctatccgccaggtctccgaggctctgggttccaacggttcaacttccatg
ggttcggtgtgtgcctccaccttgtccctgtacaacgcaggtgttccgctcaaggctccg
gtggcgggcatcgccatgggccttgtctccggtgaggttaaaggtaaggagaagttcgtt
gcgctgaccgatatcctcggcgccgaggacgctttcggcgacatggactttaaggtcgca
ggtacctccgaattcatcaccgctctgcagctggacaccaagctggatggcattccatcg
cacgtgcttgccgacgccctcgagcaagcccgcgatgcccgctccgccatcctcgaaacc
atggctgaggttatcgaaggaccggacgagatgtctggccttgccccgcgtatcacctcg
gtgaccatcccggtcaacaagattggtgagctcatcggtccgaagggtaagaccatcaac
accattaccgaggaaaccggcgctgatgtctctatcgaggaagacggcaccgtttacgtc
tccgctgctaccggcgaggctgctgaggccgccatcgagcgcgtcaacagcattgccaat
ccgcagctacccaaggtcggcgagcgtttcctcggcaccgtggtgaagaccgtggccttc
ggcgccttcgtatccctgaccccgggccgcgacggcttggtgcacatctcgaagctgggc
ggcgatgagcgtatcgaaaaggtcgaagacgtggtcaacgtcggcgacaagatccaggtc
gagatcgcggacatcgataaccgcggcaagatttccctggtcccggttgaggaagactaa
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