Corynebacterium minutissimum: NCTC10288_00965
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Entry
NCTC10288_00965 CDS
T05574
Name
(GenBank) Ribonuclease j Rv2752c
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cmin
Corynebacterium minutissimum
Pathway
cmin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10288_00965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmin03019
]
NCTC10288_00965
Messenger RNA biogenesis [BR:
cmin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC10288_00965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
DUF7822
Motif
Other DBs
NCBI-ProteinID:
SQH99676
UniProt:
A0A2X4RBT5
LinkDB
All DBs
Position
1:1048486..1050582
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AA seq
698 aa
AA seq
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MTESRNRSRKVTRKAGPPAETETASNEAASPVFQAPNESAATGTNSNESDNSNNSNSEDG
NRRSRSRGSRGGRGRDRGGNGGANNNGNNGNNNGGRNNGRNRNNNRGRRNVPKSMQGADL
TKRLPEPPKQQKDALRIYALGGISEIGRNMTVFEYQDELLIIDCGVLFPSSGEPGVDLIL
PDFGPIEKKIHKVKALVVTHAHEDHIGAIPWLLKLRPDIPIVASRFTIALIAAKCKEHRQ
KPKFVEVNEKSDVNYGPFRCRFWAVNHSVPDALGVMLGTPAGNIIHTGDIKLDQTPLDNR
PTDLPALSRYGDEGVDLMLCDSTNANIPGVSASEGDIPATFKRLVSGAKQRVIIASFASN
VYRVQAAIDAAVAAGRKVAFNGRSMMRNMEIAEKMGFLKVPRGTIIPIDEAAKMAPHKVL
LITTGTQGEPMAALSRMARREHRQITVRDGDLIIFSSSLIPGNEEAVFGVINMLSQIGAE
VITNKEAKVHASGHGYGGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVARDRVV
LAQNGVVVDLRNGRAEVVGQIQVGNLYVDGVSMGDVDADTLADRTNLGAGGVVSITCVID
NRTSRLLEHPTVSTTGFSDDDRGIVPEVAEMVENTMNDLAAEGENDTYRMVQKIRRKVAK
LMSSKYKREPVILPTIVPTNSDILLPDDDEVLASRESL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcccgtaaccgctcccgcaaggtaacccgcaaggcgggcccgcctgcggag
actgagaccgcctcgaatgaggcggcttcgccggttttccaagcgccgaatgaatcggct
gcgactggcactaattcgaacgagtctgataactcgaataactcaaattctgaggacggc
aaccgccgctcccgctcccgtggttcccgcggcggccgtggccgcgaccgcggtggcaat
ggcggcgctaacaacaacggtaacaacggcaataacaatggtggtcgcaacaacggccgc
aaccggaataacaaccgtggtcgccgcaatgtgcctaaatccatgcagggcgcggacctg
accaagcgtttgccggaacctccaaagcagcaaaaggatgccctgcgcatttacgctctg
ggtggtatctctgagatcggtcgcaacatgaccgtctttgagtaccaagatgaactgctc
atcatcgactgcggtgtgcttttcccgtcctccggtgagccgggcgtggatcttatcctg
ccggactttggtccgattgagaagaagattcacaaggtcaaggccctcgtggtgactcac
gcgcacgaggatcacattggcgctatcccgtggcttttgaagctgcgcccggatatcccg
atcgtggcatcgcgcttcaccatcgcgctcatcgctgcaaagtgtaaggagcaccgccag
aagccgaagttcgtggaagtcaacgagaagtctgatgtgaactacggcccgttccgctgc
cgcttctgggcggtgaaccactcggtcccggatgcacttggtgtcatgcttggtactccg
gcaggcaatatcattcacaccggtgatatcaagctggaccagaccccgctggataaccgc
ccgactgacctcccggcactgtcgcgctacggtgatgagggcgtggacctcatgctgtgt
gactccaccaacgccaacatcccgggtgtttctgcctctgaaggtgacattccggcgacc
tttaagcgtttggtttctggagccaagcagcgcgtgatcatcgcgtccttcgcgtcgaac
gtgtaccgcgtgcaggcggctatcgacgctgccgtggctgccggccgaaaggtggccttc
aacgggcgttccatgatgcgcaacatggaaatcgcggaaaagatgggcttcctcaaggtt
ccgcgcggcaccatcattccgatcgatgaggcagccaagatggctccgcacaaggttctg
ctcatcaccacgggtacccagggcgagccgatggctgctttgtcccgcatggcccgtcgc
gagcaccgtcagatcacggtccgtgatggtgacctcatcatcttctcctcctcgctcatt
ccgggtaatgaggaggcagtattcggtgtcatcaacatgctgtcccagattggtgctgaa
gttatcaccaacaaggaagccaaggttcacgcctccggccacggctacggtggtgagctg
ctgttcctgtacaacgcagcacgcccgaagaatgccatgccggttcacggcgaatggcgc
cacttgcgcgcgaacaaggagctcgcaatctccacgggtgttgcccgtgatcgcgtagtc
cttgcccagaacggtgtcgtggttgacttgcgcaatggccgcgccgaggtcgtcggccag
atccaggtgggcaacctttacgtcgatggcgtgtccatgggtgacgtcgacgcggacacc
ttggcagaccgcaccaacttgggtgcaggaggcgtggtgtcgattacctgtgtcatcgac
aaccgcacctcgcgtctgctcgagcacccgacggtatccactaccggtttctctgatgac
gaccgtggcatcgtgccggaggtcgcagagatggtggagaataccatgaacgatctcgcc
gcagagggcgagaatgatacctaccgtatggtgcagaagattcgccgcaaggtagcgaag
ctcatgtcttcgaagtacaagcgtgagccggttatcctgccgacgatcgttccgaccaac
tcggacatcctgttgccggacgacgacgaggtgctcgcctcccgcgagtcgctctaa
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