Corynebacterium minutissimum: NCTC10288_01728
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Entry
NCTC10288_01728 CDS
T05574
Symbol
pcrA_1
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmin
Corynebacterium minutissimum
Pathway
cmin03420
Nucleotide excision repair
cmin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10288_01728 (pcrA_1)
03430 Mismatch repair
NCTC10288_01728 (pcrA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmin03400
]
NCTC10288_01728 (pcrA_1)
Enzymes [BR:
cmin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10288_01728 (pcrA_1)
DNA repair and recombination proteins [BR:
cmin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10288_01728 (pcrA_1)
MMR (mismatch excision repair)
Other MMR factors
NCTC10288_01728 (pcrA_1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
SQI00417
UniProt:
A0A2X4RAL2
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All DBs
Position
1:complement(1851728..1854160)
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AA seq
810 aa
AA seq
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MEPEPEPEEPEMGVDPLLEGLNPQQAEAVTHSGSPLLIVAGAGSGKTAVLTRRIAFLMRS
RGVAPWQILAITFTNKAAAEMKERVGQLVGPVAERMWVSTFHSICVRILRNNAQLVPGLN
TNFTIYDGDDARRLLTMIAKDMQLDLKKYSARVLANQISNRKNELISPEEARAEAEKTKN
PFELTVAKVFEEYQRRLRAANSVDFDDLIGEVVRIFNQHPQVVEFYRRRFKHVLIDEYQD
TNHAQYALVSALVGRGELPHDAPELCVVGDSDQSIYAFRGATIRNIQEFERDYPQAHTIL
LEQNYRSTQTILNAANAVIAKNEGRRKKNLWTAHGEGAQIVGYVADNEHDEARYIASEID
SLADKGKSYSDIAIMYRTNNASRALEDVFVRSGIPYKVVGGTRFYERREIRDLVAYLRIM
DNPDDTVSLRRIINVPKRAIGDKAQAQIALHAENLGISFGAALRDAADGQVAGLGTRAVN
AVSKFNEMMDGVREQLPSMINEVTGQPDLGELLNALLDATGYRAELENSNDPQDGARLDN
LNELVSVAREFSSEAANQMAFTGADAQETPELAEGDAAPGSLQAFLEKVSLVADADQIPD
HESGVVTLMTLHTAKGLEFPVVFLTGWEDGQFPHMRSLGDPKELSEERRLAYVGITRARE
QLYLTRAILRSSWGNPVTNPASRFLAEVPEDLIDWRREEPDSSLSSAWGGDDSYYYGRSF
GADSGFFRSRGRGATSSPSQRTRRPASATSMPKNNHLNLVVGDRVNHAKYGLGTVIEASG
TGARATVTVDFGSAGKVRLMLIGGVPMEKL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggagccggaaccggaaccagaagagccggaaatgggcgttgatccactgctggaagga
cttaacccacagcaggcagaggccgtaacccactctggctcgccgctgcttattgttgcc
ggtgcaggatccggcaagacggcagtgttgacgcggcgcattgcctttcttatgcgctcg
cgcggggtagctccttggcagattctcgctatcacctttaccaacaaggcagctgcagag
atgaaggagcgcgtcggccagcttgtcggcccggtggctgagcgcatgtgggtctcaacg
ttccactccatttgtgtacgcatcttgcgtaacaatgcgcagctcgtgccggggctgaat
acgaacttcactatttatgacggtgatgatgcgcgccggttgctcaccatgattgccaaa
gacatgcagctggaccttaagaagtactctgctcgcgttctggctaatcaaatttcgaac
cgcaagaatgaacttatctctccagaggaggcacgcgctgaagcggagaagacgaaaaat
cccttcgaactcaccgtggcgaaggttttcgaggagtaccagcgccgcctgcgtgcagcg
aactctgtggattttgatgacctcattggtgaggttgtgcgcattttcaaccagcatcca
caggtggtggagttctatcgtcgccgcttcaagcatgtgcttatcgacgaataccaggac
accaaccacgcgcagtacgctctcgtctctgctttggtaggaaggggagagcttccccac
gatgcccctgaattgtgcgtggtgggtgactcggatcagtccatttatgccttccgcgga
gccacgatccgtaatatccaagaattcgagcgtgattacccgcaagcgcacacgattctt
ctggaacaaaattaccgctcgacccaaaccattttgaacgcagcgaatgctgtcattgcc
aagaacgagggccgccgcaagaagaatctgtggacggcacacggcgaaggcgcgcagatt
gtgggttacgtggcagacaacgagcacgatgaagcacgctatatcgcctcggagatcgat
tcccttgcggacaaggggaagtcctattccgatatcgcgatcatgtaccgcacgaataat
gcttcccgtgcgcttgaggatgtgttcgtacgttccggcattccctacaaggtggtgggc
ggaacacgattctatgagcgccgcgagattcgagatctcgtggcgtacctgcgcattatg
gataacccggatgacacggtgagtctgcgccgcatcatcaacgtgcctaagcgcgccatc
ggtgacaaagcccaagcacagattgccctccacgcggagaacctgggtatcagttttggt
gctgctctgcgggatgctgcggacggacaagtcgctgggctgggaacacgcgcagttaat
gcggtgagcaaatttaacgagatgatggacggcgtgcgtgaacagctgccgagcatgatc
aatgaggtcaccggccagccggacctaggggagctgctgaatgcactgcttgatgccacc
ggctaccgcgccgaactggaaaactctaacgacccgcaggacggcgcccgtctggataac
ctcaacgaattggtgtccgtggctcgtgaatttagctcagaggcagctaaccaaatggcc
tttacgggagcggatgcacaagagactcctgagcttgcggaaggcgacgccgcgccgggc
tcgttgcaagccttccttgaaaaagtctcgctcgtggcggacgcggatcagattccggac
cacgaatccggggtcgtcacactgatgactctgcacactgcgaagggccttgaattccca
gtggtattccttaccggctgggaggacggacagttcccgcacatgcgctctttgggtgac
ccgaaagagctgagtgaggaacgtcgcctcgcctacgtgggtattacccgcgctcgagaa
cagctctacctcacgcgcgcgattcttcgttcatcgtggggtaacccagtgacgaacccg
gccagtcgcttcctcgccgaggtcccggaggacctcatcgactggcgccgtgaagaacca
gacagctctctgtccagcgcgtggggtggagatgactcttactactatggacgcagcttt
ggcgcggacagcgggtttttccgctcccgaggacgaggcgctacgtcttccccttcgcag
cgcacgcgcaggccagcttcggctacatcaatgccgaagaataaccatctcaatttagtt
gtaggggaccgcgtcaaccacgcgaagtacgggctgggcacggtcatcgaggcctccgga
accggtgcacgcgcaacggtcaccgtggacttcggttcagcgggcaaagtccgcctcatg
cttatcggcggtgtgccgatggaaaagctctaa
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