Corynebacterium minutissimum: NCTC10288_01830
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Entry
NCTC10288_01830 CDS
T05574
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cmin
Corynebacterium minutissimum
Pathway
cmin03420
Nucleotide excision repair
cmin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10288_01830 (pcrA_2)
03430 Mismatch repair
NCTC10288_01830 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmin03400
]
NCTC10288_01830 (pcrA_2)
Enzymes [BR:
cmin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10288_01830 (pcrA_2)
DNA repair and recombination proteins [BR:
cmin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10288_01830 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
NCTC10288_01830 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
HHH
AAA_11
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
SQI00512
UniProt:
A0A2X4RTG0
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All DBs
Position
1:complement(1961400..1963448)
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AA seq
682 aa
AA seq
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MRPDLSLLDEDQRAAATAPRGPVCILAGAGTGKTRTITYRIAHMVDQGFVNPQRVLAVTF
TTRAASEMRERLNQMGVGGVQAQTFHAAARRQLKYFWPQVAGDLPWQLIDNKFSLVGRAV
RSLGLDNTKDTIRDFLGEIEWAKSSLIGPEGYPGVIESTDREAPGDPQAVAEVFRRYEDM
KSTPDLMYLDFDDLLMHIAGAIENVPSVAEVFREQYRTFVVDEYQDVTPLQQRVLEAWLG
DRDDLTVVGDANQTIYSFNGASPEYLLDFSRTYPQATMIKLQRDYRSTPQVTQLANEVIA
KASGRAAGTRLELQGMREPGPEPTFKAYESEEVEAKEVAGQVLTLLNQGVKASEIAILYR
INAQSEQFEQALADAGVVYQVRGGEGFFRRPEILEAIRVLIAASRRDDLPDDPVAVARAA
FVELGLTATEPQGAQARERWQSLSALVDLIAQIVEDHEGIDLNGVLGELHRRSENKHNPT
MEGVTLATIHAAKGLEWDAVFLVGLTEKLLPINHAIKAGDEQVEEERRLFYVGITRAREH
LALSWALAKTTGSRASRERTRFLDGLVPGIEESESSNRRYRPRRCRVCSSELTSPAEKVL
GRHEWCEYEGDEDVFNALRSWRASVAKDSKVPAYVVFSDATLQAISEALPATEAELLDVS
GVGPTKLERYGAEVLQIIASTR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagaccggatctgtccctgctcgatgaggaccagcgcgccgctgctacggcgccgcgc
ggccccgtgtgcatcctggcgggcgcaggaacgggtaaaacccgcacgattacctaccgc
attgcccacatggtggaccagggttttgtcaatccccagcgtgttctcgctgtcaccttc
accacccgtgcggcaagtgagatgcgcgagcggcttaaccagatgggtgtggggggagtg
caggcgcaaaccttccacgccgctgcccgccggcagctgaagtatttttggccgcaagta
gcgggggacttgccgtggcagctcattgataacaaattcagccttgtcggacgcgcagtc
cgttcattaggcctcgacaataccaaggacactattcgtgatttcctgggggaaatcgag
tgggccaaatcatcgctcattggccccgagggctatccaggcgtcatcgaaagcacagac
cgcgaggccccgggtgatccgcaggccgtcgccgaggtcttccgccgctatgaggacatg
aaatccaccccggatctcatgtacctcgattttgatgacctcctcatgcacattgccggg
gctattgagaatgtgccatcggtagcggaagtattccgtgagcagtaccgcacgtttgtc
gtggatgagtaccaggatgtcactccactgcagcagcgtgtgcttgaagcctggctgggg
gaccgtgatgacctcacggtcgtgggtgatgccaaccagaccatttactccttcaacggt
gcctcaccggagtacttgttggacttctcccgcacgtacccgcaggccaccatgatcaaa
ctgcagcgagactaccgctccacgccgcaggttacgcagttggctaatgaggtcattgcc
aaggccagcggccgtgccgccggtaccaggctggaactgcaaggtatgcgcgagcccggc
ccagaacccacctttaaggcttatgaatctgaggaagtagaagccaaggaagttgcgggc
caggtactgaccttgctcaaccaaggtgtgaaagcctctgagatcgccatcctctatcgc
atcaatgcgcagtcggaacagtttgagcaggcgcttgcggatgccggagtggtctaccaa
gtccgcggcggtgaaggtttcttccggcgccccgaaatcttggaggctatccgtgtgctc
atcgctgcatcgcgtcgtgacgatcttccggatgatccggttgccgttgcccgcgcagct
ttcgtagagctgggcctgacggctacggaaccacagggtgcccaggcgcgcgagaggtgg
cagtcactgagcgcactcgtggatctcattgcccagatcgtggaggaccacgagggcatt
gatctcaatggcgtgctgggagagctgcaccgccgctcagaaaacaaacacaaccccacc
atggagggggttaccttagctaccattcacgctgccaagggcttggagtgggatgcggtc
ttcctcgttggtctcaccgaaaagctattgcccattaaccatgccatcaaagcgggcgat
gaacaggtggaggaggaacgccgactgttctacgtgggtattactcgtgcccgcgagcac
ctggccctgtcgtgggcgctggcaaaaaccactggttcgcgggcatcgcgcgagcggacc
cgtttcctcgatggcctcgtgccggggattgaggaaagcgagtcgagcaatcgccgttac
cgcccgcggcgctgcagggtctgctccagcgagctcaccagccctgcggaaaaggtgttg
ggccgccacgaatggtgcgagtacgaaggagacgaggacgtcttcaacgctctgaggtca
tggcgtgcctcggtggccaaggactctaaagttcctgcctatgtcgtcttttctgatgcc
accttgcaggctatctcggaggcgcttcccgccacggaagccgagctgcttgacgtctca
ggcgttggcccgacgaagctagagcgctacggcgcggaggttctgcagattatcgcctca
acacgttaa
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