Corynebacterium minutissimum: NCTC10288_02163
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Entry
NCTC10288_02163 CDS
T05574
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cmin
Corynebacterium minutissimum
Pathway
cmin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC10288_02163 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmin03021
]
NCTC10288_02163 (rpoC)
03400 DNA repair and recombination proteins [BR:
cmin03400
]
NCTC10288_02163 (rpoC)
Enzymes [BR:
cmin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC10288_02163 (rpoC)
Transcription machinery [BR:
cmin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC10288_02163 (rpoC)
DNA repair and recombination proteins [BR:
cmin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC10288_02163 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
SQI00844
UniProt:
A0A2X4URW9
LinkDB
All DBs
Position
1:complement(2324776..2328771)
Genome browser
AA seq
1331 aa
AA seq
DB search
MFDVNLFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
SCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITSVDEEARHNDQSTLEAEMLLEKKDVEDDVEAEIAERAAKLEQD
LAELEAAGAKADARRKVQNAADKEMQHIRERGEREVARLDEIWNTFIKLAPKQMIIDETI
YEELVDRYEDYFTGGMGAEAIQTLIRNFDLEAEAEVLKEIINNGKGQKKMRALKRLKVVA
AFLRSGNDPAGMVLDAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPKLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYYLTMDKGEDEIGGA
GRYREATEDQPAQGVYSSYAEAIMARDRGVLGLQAPIKVRISHLRPPADIEAEHFPDGWQ
KGQAWMAETTLGRIMFNDLLPWNYPYLEGVMVRKGGAGNKMLLGDVINDLAAKYPMITVA
QVLDKMKDAGFYWATRSGVTITMDDVLVLPNKHEVLESYEKEAERIERKYWEQGALTERE
RYDRLVELWKDATDTVGEAVENMYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKG
DYITRPIKTSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREE
DCGTRQGVRVPLGVEVVPGSYDLHELWETSASGRVVANDVKDENGEVIAEAGADLTEELS
RKIVNAGVLEIKVRSVLTCQTPAGVCAKCYGKSMASGQLVDIGEAVGIVAAQSIGEPGTQ
LTMRTFHQGGVGGDITGGLPRVQELFEARNPKNRAPIASVDGTVSLSDEGNFWTLTITPD
DGSDNVVYEKLSKRQGLAQVRRPMESNPDAMIERSLRDGDHVETGDRLMRGAADPHDVLE
VLGRRGVEKHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIDAGTTDLLPGNLIDL
SEAKQVNAAQVAEGGQPAQLRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSD
QLIGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGFGEFTG
ASVPLEEDYTY
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacgtaaatctcttcgacgagctccgtatcggtctggccaccgccgatgacatc
cgccgctggtccaagggcgaagtcaagaagcccgagaccattaactaccgaaccctcaag
ccggagaaggacggcctcttctgcgagcgcatcttcggccctacccgcgactgggagtgc
tcctgcggtaagtacaagcgtgtccgctacaagggcatcatctgtgagcgctgcggcgtc
gaggtgaccaagtccaaggtgcgtcgtgagcgcatgggccacatcgagctggccgcgccg
gttacccacatctggtacttcaagggcgttccttcccgcctgggctacctgctggacctg
gctccgaaggaccttgagcgcatcatctacttcgctgccaacatcatcacctctgtggac
gaggaagctcgccacaatgaccagtccactctggaagcagaaatgctgctggagaagaag
gacgtggaggatgacgtcgaggcagagatcgctgagcgcgctgccaagctcgagcaggat
ctggccgagctggaggccgccggcgcaaaggctgatgcgcgtcgcaaggtccagaacgct
gccgacaaggagatgcagcacatccgcgagcgcggtgagcgcgaggttgctcgcctcgac
gaaatctggaacaccttcatcaagctggctccgaagcagatgatcatcgatgagaccatc
tacgaagagctggttgaccgctacgaggattacttcaccggcggcatgggtgctgaggct
atccagaccctcattcgcaactttgacctcgaggctgaggctgaggttctcaaggagatc
atcaacaacggcaagggccagaagaagatgcgtgcccttaagcgcctcaaggttgtcgca
gccttcctgcgctcgggcaacgacccggccggcatggtgctcgacgctatcccggtcatc
ccgccggagctgcgcccgatggtgcagttggacggtggccgcttcgctacctccgacctc
aatgacctctaccgtcgcgtcatcaaccgcaacaaccgcctcaagcgcatgatcgacctc
ggcgcgcctgagatcatcgtgaacaacgagaagcgcatgttgcaggagtccgtcgatgcg
ctgttcgacaacggccgccgcggccgtccggttaccggcccgggcaaccgcccgctgaag
tccctgtctgacctgctcaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgtgtggactactccggccgttccgtgattatcgttggtccgcagctcaagctgcacgag
tgtggtctgccgaagctcatggcactggagctgttcaagcccttcgtcatgaagcgtctg
gtggagaatgactacgcccagaacatcaagtccgccaagcgtatggtggagcgtcagcgc
cctgaggtgtgggacgtcctcgaagaggccatttctgagcacccggtgatgctgaaccgt
gcaccgaccctgcaccgcctgggtatccaggctttcgagccgaagcttgttgagggtaag
gccatccagctgcacccgctggcctgtgaggccttcaacgccgacttcgacggtgaccag
atggcagtccacctgccgctgtccgctgaagcacaggcagaggcccgcgtcctcatgctg
gcctccaacaacattctgtccccggcgtccggtaagccgctggctatgccgcgcctggat
atggtgaccggcctctactacctcaccatggacaagggcgaggacgagatcggtggcgcg
ggacgctaccgtgaagctaccgaagaccagcctgcacagggtgtctactcctcctacgcg
gaagccatcatggctcgcgaccgcggcgtgctgggcctgcaggccccgatcaaggtgcgc
atctcgcacctgcgcccgccggcagatattgaggccgagcacttcccggacggttggcag
aagggccaggcctggatggcagagaccaccttgggccgcatcatgttcaacgacctgctg
ccgtggaactacccgtacctggagggcgtcatggtccgtaagggcggcgccggcaacaag
atgctgcttggtgacgtcatcaatgacctcgccgcgaagtacccgatgatcaccgttgcc
caggttctggacaagatgaaggacgctggcttctactgggctacccgttctggcgtgacc
atcaccatggatgacgttctggttctcccgaacaagcacgaggtgcttgagtcctacgag
aaggaagcagagcgcatcgagcgcaagtactgggagcagggtgctcttaccgagcgcgag
cgctacgaccgcctcgttgagctgtggaaggacgctaccgataccgtcggtgaggccgtc
gagaacatgtacccggatgacaacccgattccgatgatcgtgaagtccggtgctgccggt
aacatgcgtcagatctggaccctggccggtatgaagggcatggttgtgaactccaagggt
gactacatcacccgcccgattaagacctccttccgtgagggcctgtcggttctggagtac
ttcaacaactcccacggttcccgtaagggcctggcggataccgctctgcgtaccgccgac
tccggctacctcacccgtcgtcttgtggacgtggcacaggatgtcatcgtccgcgaggaa
gactgtggcacccgtcagggtgtgcgcgtcccgctcggcgtcgaggttgtccctggttcc
tacgacctgcacgagctgtgggagacctccgcatccggccgcgtcgtggctaacgacgtc
aaggatgagaacggcgaggtcatcgctgaggccggcgccgatctgactgaggagctcagc
cgcaagatcgtcaacgctggcgttctggaaatcaaggtccgctccgtgctgacctgccag
actccggctggtgtctgtgccaagtgctacggcaagtccatggcctccggccagctcgtc
gatatcggcgaagcagtcggcatcgtggccgcacagtccattggtgagccgggtacccag
ctgaccatgcgtaccttccaccagggtggtgtcggtggcgatattaccggtggtctgccg
cgtgttcaggagctctttgaggcccgtaacccgaagaaccgtgcgccgatcgcttctgtc
gacggcaccgtgtccctatccgatgagggcaacttctggaccctgaccatcaccccggac
gatggctccgacaacgtggtctacgagaagctatcgaagcgccagggcctggctcaggtc
cgccgcccgatggagtccaacccggatgccatgattgagcgctccctgcgcgatggtgac
cacgtggagaccggtgaccgcctcatgcgcggtgctgctgacccgcacgacgtgctggag
gtccttggccgccgcggtgtggagaagcacctcatcgacgaggtccaggccgtctaccgt
gctcagggtgtggctatccacgacaagcacatcgagatcatcatccgccagatgctgcgt
cgcggcaccgtcatcgacgctggtaccaccgacctgctgccgggtaacctcattgacctc
tctgaggccaagcaggtcaacgccgcacaggttgctgaaggtggccagccggctcagctg
cgcagtgagatcatgggtattaccaaggcctccctggctaccgagtcctggctgtctgcg
gcctccttccaggagaccacgcgcgtgcttaccgacgccgccatcaacaagcgctcggat
cagctcattggtctgaaggagaacgtcatcatcggtaagctgatcccggctggtaccggt
atttcccgttaccgcaacatcagcgttaagccgactgaggccgcacgcaatgctgcgtac
tccatcccgacctatggtgattccatctacggcgacgacggcttcggtgagttcaccggc
gcttctgtgccgctggaggaggattacacctactaa
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