Catenibacterium mitsuokai: NQ499_09960
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Entry
NQ499_09960 CDS
T08440
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cmit
Catenibacterium mitsuokai
Pathway
cmit03030
DNA replication
cmit03430
Mismatch repair
cmit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NQ499_09960 (dnaE)
03430 Mismatch repair
NQ499_09960 (dnaE)
03440 Homologous recombination
NQ499_09960 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmit03032
]
NQ499_09960 (dnaE)
03400 DNA repair and recombination proteins [BR:
cmit03400
]
NQ499_09960 (dnaE)
Enzymes [BR:
cmit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NQ499_09960 (dnaE)
DNA replication proteins [BR:
cmit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NQ499_09960 (dnaE)
DNA repair and recombination proteins [BR:
cmit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NQ499_09960 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UWO52570
LinkDB
All DBs
Position
complement(1912125..1915190)
Genome browser
AA seq
1021 aa
AA seq
DB search
MFGHLQIKSAYSFQESTLLINALIDNAKSKHIQALALTDDNNMYGAYEFYEACKKASIKP
ILGVNASIMFNDDLIHLALYARDDVGYKDLVRIVSDINLNENKAITLKALSNYRDHLYVV
SHEYEDRLIEKEATSKEDLLTHAQIESPVLSFMKTMKKLFGASYRIMIVEDGLKGHTLRN
QTLIKYAQFLDIPCIWGNDVRYLHPHDAFTLDLLQASKKGEVLSKDYEPLTSERYLKTEK
EIRELFSRYPDIIKNTEEMIDNCYGSIQKTKNGLPRYQTPHGDSGAYLRHLCIKGLKQRF
KNQTITDDYKDRLLYELKTIHTMGYDDYFLIVFDYVQYAKKHGILVGPGRGSAAGSLVAY
CLGITNIDPLKYDLLFERFLNPERVSMPDIDVDFQDDRRDEVIQYVCNKYGHDHVAQIVA
FSTYGPRVAIKDLGKVMGIPLPRLEMIAKMVPTAPKHRKSITEVYSTSASFQDMIQKDPV
LSRLIAPMSLVEYLPRNITMHAAGVVLSYEPLRDVVPLVIGPSDMIMSQYSKDYIEKTGL
LKMDFLGLKNLTMIDYIMKDIERRLGQTFSINSIPLNDARTYHLIARGDTTGVFQLESNG
MRSLLMKMKPDHFDDIVAAVALYRPGPMENIPLYLEGRKNKNNITYLVKELEPILKSTYG
IMIYQEQIMQIAQVIAGFSLGRADILRKAVSKKDESMMASMKEEFLQGAIKKGFDEKIAL
KLYQMIEKFANYGFNKSHSVAYGYMAYQLAYLKANYPLYFFAAILSNESGSASSKMRIIE
ESKRYGVKILPPSINYSYSRFVVEEGGIRYSLVSIKNVGAAGYKMILKEREKGLFKDMYD
FLARIPSLSSKMLESLIDAGAFDEFNKNRAYLRKNISLMLEYIQLGVDEKPIFEEVRENK
YERLEREREVLGLYVSTHPIVYVKQKIKHPLVNFVDVENYMDRNILVVCSISSVRAIVDK
KGREMAFIEGQDETGQVEFVCFSNQYERFKNILERGKIVEMNVRVQYRDRLSLIINQVKE
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacacttacaaattaaaagtgcttatagctttcaagagagtactctattaatt
aatgcgcttatagacaatgcaaaatcaaaacatatccaggctcttgccttaacagatgat
aacaacatgtatggggcctatgaattttatgaagcctgcaagaaggcttctattaagccg
atactaggtgtcaatgcctctattatgtttaatgatgacctgattcatcttgcactttat
gcacgtgatgatgtaggttataaggatttagtacgtattgtgagtgatattaatctcaat
gagaataaagctatcacattgaaagctttatccaactatcgtgatcatctttatgttgta
tctcatgaatatgaagatcgactcattgaaaaagaagctacaagtaaagaagacttactc
actcatgctcaaatagagagtccagtactaagctttatgaaaactatgaagaagctcttt
ggcgcctcttatcgtatcatgattgtggaagatggcctcaagggacatacacttcgtaat
cagacattgattaaatatgctcaattcttagatattccctgtatctggggtaatgatgtg
cgttatttacatccacatgatgcctttacactggatctcttacaagcttctaaaaaggga
gaagtgctttctaaggattatgaaccacttacaagtgagcgttatctaaaaacagaaaaa
gaaatcagagaattatttagtcgttatccagatattattaagaatacagaagaaatgatt
gataactgttatggttctattcaaaaaacaaagaacggtcttcctcgctatcagacacct
catggtgatagcggggcatatctcagacatctttgtattaaaggattgaaacaacgcttt
aaaaatcagactatcacagatgattataaagaccgtttactttatgaattaaaaactatt
catactatggggtatgatgattacttcttaattgtatttgattatgtacaatatgcgaaa
aaacatggtatactcgtaggcccaggaagaggatctgcggcaggctcactggttgcctat
tgcttaggaattacaaatattgatcctttaaaatatgatcttctttttgaacgtttcttg
aatccagaaagagtatccatgccagatattgacgtagacttccaggatgatcgtcgtgat
gaagtcattcaatatgtatgcaacaaatatggtcatgatcatgtggctcagattgtcgct
ttttctacatatggtccacgtgtcgcaataaaggatttaggaaaagtgatgggtatccct
ttaccaagactcgaaatgattgcgaagatggtacctactgcacctaaacatcgtaaaagt
attactgaagtttattctacaagtgcctcattccaggatatgattcaaaaagatccagtg
ctttcacgccttattgcgcctatgagcttagtagaatatcttccacgtaatatcacaatg
catgcagcaggggttgtcttatcctatgaaccattaagagatgttgtgcctttggtcatc
ggtccaagtgatatgatcatgagccagtattcaaaggactatattgaaaaaacaggttta
ctcaagatggactttttaggacttaagaatctgactatgattgattatattatgaaggat
atagaaagaagacttggtcagaccttttctatcaatagtatccctcttaatgatgcacgt
acctaccaccttatcgctcgtggtgatacaacaggggtcttccagttagaatcaaatggt
atgcgttcattacttatgaagatgaaaccggatcattttgatgatatcgtcgctgcagtg
gccttatatcgaccaggtccaatggaaaatattcctctctatctagaaggtagaaagaat
aaaaataatattacttatttagtcaaagaacttgaacctattctaaagtctacatatggc
attatgatttatcaggaacagatcatgcagattgctcaggtcatcgcaggattctcttta
ggacgtgcagatatattaagaaaagctgtttctaaaaaagatgaaagcatgatggctagt
atgaaggaagaattccttcagggagctattaagaaaggatttgatgaaaagattgccttg
aaactttatcagatgatagagaaatttgcgaattatggctttaataagagtcactctgtt
gcctatggttatatggcttatcaattggcttatttaaaagccaattatccactctatttc
tttgcagccattctttccaatgaatcaggttctgcttctagtaagatgcgtattatagaa
gaatctaaacgctatggagtcaagattcttccaccttctattaactattcttattcacgc
tttgtagtagaagaaggaggaatacgttattctttagtctctattaaaaatgtaggggct
gcaggctataagatgattcttaaggaaagagaaaaaggtctctttaaggatatgtatgat
ttcttagcccgtatcccttctctttcatctaagatgttagaaagtttaattgatgcaggg
gcttttgatgaatttaataaaaatcgtgcttatttacgtaagaatatttcactgatgtta
gagtatattcaattaggggtggatgaaaagccaatctttgaagaagtcagagaaaacaaa
tatgaacgtttagaaagagaaagagaagtacttggtctctatgtatctacacatcctatt
gtttatgtaaaacagaagatcaagcatcctttagttaattttgtagatgtagaaaactat
atggatcgtaatatattagttgtatgttctattagttcagtacgtgccattgtagataag
aaaggtcgagaaatggcatttattgaaggacaggatgaaacaggacaggtagaatttgtc
tgcttctctaaccaatatgaacgttttaagaatatattagaaagaggaaagattgtggaa
atgaatgtacgtgttcaataccgtgatcgtttatctcttattatcaatcaagtaaaggag
ttataa
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