Catenibacterium mitsuokai: NQ499_11215
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Entry
NQ499_11215 CDS
T08440
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
cmit
Catenibacterium mitsuokai
Brite
KEGG Orthology (KO) [BR:
cmit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmit03019
]
NQ499_11215
03009 Ribosome biogenesis [BR:
cmit03009
]
NQ499_11215
Enzymes [BR:
cmit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQ499_11215
Messenger RNA biogenesis [BR:
cmit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ499_11215
Ribosome biogenesis [BR:
cmit03009
]
Prokaryotic type
rRNA helicases
NQ499_11215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UWO52813
LinkDB
All DBs
Position
complement(2160645..2162018)
Genome browser
AA seq
457 aa
AA seq
DB search
MDLFDKFQFNDYVKKTLNNIHFTSPTPIQDKVIPLVYKNKDIIGISQTGTGKTHSFLIPI
IDRIDTNADYVQAVITTPTRELAHQIYENAKEFKKENPDLRISLVIGGSDKQKAINKLST
QPHIVIGTPGRIKDLSLNEQALIITTATTFVVDEADMTLEYGYLEDLDAVLSKMREDLQM
LVFSATIPEHLWPFLRKYMNAPELVQIDAHKKTTDNTKHYLIHTKHHDRYTVLKNIMDII
DPYICLIFCNKRTEATKLSDQLRSDGYRVGEIHGDLEPRERKQMMRRINNNEYQYIVATD
IAARGIDIDGVSHVINMEFPTERDFYIHRSGRCGRGKYKGECYSMYDSSNQQMVESLEKK
GIHFEVKEIRNGVLTDAKARNKRKNRNAPQSELEKEIQRIIKRPKKVKPGYKKKRKREIQ
AIYQKKKRDIIRKDIQRQKKERAKQAQREKRERENMQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatttatttgacaaatttcaatttaatgattatgtaaaaaagactttaaacaacata
catttcacatcaccaacacctatacaggataaggtgatcccccttgtttataagaataaa
gatattattggtatctcacagacaggtactggtaaaactcattcattcttaattcctatt
attgatcgtattgatacaaatgcagattatgtacaggctgttattacaactcctacaaga
gaacttgcacatcagatctatgaaaacgcaaaggaatttaagaaagaaaaccctgattta
agaatctcactagtgattggtggttctgataagcagaaggctattaataagctttctaca
cagccacatatcgttattggtacaccaggacgtattaaagacttatctttaaatgaacag
gctttaattatcactacagctactacatttgtagtggatgaagccgatatgactttagaa
tatggttatcttgaagatttagatgcagtcttatctaagatgagagaagatttacagatg
cttgtattctcagctactattcctgaacatttatggccattcttaagaaaatatatgaat
gcgccagaattagtacagattgatgcccataagaaaacaacagacaatacaaaacattac
ttaattcatacaaagcatcatgaccgttatacagtattaaagaatatcatggatatcatc
gatccatatatctgcttaatcttctgtaataagagaacagaggccactaagctatctgat
cagttaagaagtgatggttatcgtgtcggtgaaattcatggtgacttagaaccacgtgaa
cgtaaacagatgatgagacgtatcaacaataatgaatatcagtacattgtagctacagat
attgcggctagaggtattgatattgatggtgtatctcatgttattaatatggaattccca
acagaaagagacttctatattcatagatctggtagatgtggtcgtggtaagtataagggt
gaatgttactctatgtatgattcatctaatcagcagatggttgaatcacttgaaaagaag
ggtattcactttgaagtaaaagaaatccgtaatggtgtattaacggatgccaaggcacgt
aataagcgtaagaatagaaatgcgccacagtctgaattagaaaaagaaattcagcgtatt
attaagagacctaagaaggttaaacctggttataagaagaagagaaaaagagaaattcag
gctatttaccagaaaaagaaaagagatattattcgtaaagatattcagagacagaaaaaa
gaacgtgcgaaacaggcacagagagaaaaacgtgaaagggagaacatgcagtga
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