Christensenella minuta: B1H56_04060
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Entry
B1H56_04060 CDS
T05665
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cmiu
Christensenella minuta
Pathway
cmiu03410
Base excision repair
cmiu03430
Mismatch repair
cmiu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1H56_04060 (recJ)
03430 Mismatch repair
B1H56_04060 (recJ)
03440 Homologous recombination
B1H56_04060 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmiu03400
]
B1H56_04060 (recJ)
DNA repair and recombination proteins [BR:
cmiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B1H56_04060 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B1H56_04060 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B1H56_04060 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
ssDNA-exonuc_C
Motif
Other DBs
NCBI-ProteinID:
AYH39722
UniProt:
A0A136Q2U9
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All DBs
Position
complement(838774..840801)
Genome browser
AA seq
675 aa
AA seq
DB search
MRYILKQKPQVNNDPRAIDRLRKALKLSRLTASLLCARGIVDPQEARDFLKPDVSQLRDP
FSFADMHDAVSAVKHTIAAKGKICVYGDYDADGISASAILYKTLSQMGAKVEVFLPNRME
HGYGLTMENIERLQGISLLITVDCGITSTQEIERAREMGMTTILTDHHECPYVLPKADYI
LNPKRQEETYPFDSLCGAGIAFKLSQALIGDAALEMIDIAALATIADIVPLLGENRAIAA
LGLRRLNEDPNPGIGALIKKACVKRTSNIDAQTVSFVLAPRINAAGRISTAKVAFELLTE
NDSARLEQLAEELCSLNTDRQQRQEKVVAEAMKMQEESGDSDHKVIVLYKHDWDIGIVGL
AASKVSERYVKPTILLGESEPGVYTGSARSIPGVNIYEALNSQAKVYEKFGGHAGAAGLT
IREEHLPQLIHRLNEFLKEHYDEEVFKPLKTYDLGITPSEVSNSLISELEMLRPFGFKNE
QVELLISGAHIEDIRSIGEDKHAKFRIAKGGRAVNAVIFGTQAAAVPGYADIVGTLNINT
FDMKPQMIVSTLSYDEPFEHKMRQTQEYLRKAAVPTEAERNAFFIGREGLLGVYAILKNV
SEKKAFFPDEEKLVRFLQKYAAEFTDEKIIFALTVFEEIGLLEIQKNDRIHIVIRSGKRE
LSDSAVYQKFGSGEK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatatcctgaaacagaagcctcaagtgaataatgacccgcgggcaattgacagg
ctgcggaaagccttgaaattatcgaggctgacagcctcgcttttgtgtgcgcggggaatc
gtggacccgcaggaagcgcgtgatttcctgaagccggacgtcagccagttgcgggatccg
ttttccttcgccgatatgcacgatgccgtaagcgcggtcaagcataccattgcggcaaaa
ggaaaaatttgcgtatatggagactatgatgcggacgggatatccgcaagcgcgatcctg
tacaaaacattgagccagatgggcgcgaaggtggaagtatttcttccgaaccggatggag
catgggtatgggcttacaatggaaaatatcgaacggctgcagggtatctctctgctgatt
actgtggactgtgggattacaagtacgcaggagatagaacgggcacgggaaatgggcatg
acgacgattttgaccgatcatcatgaatgcccgtatgtcttgccaaaggcggattatatc
ctgaatccgaagcgtcaggaggaaacgtatcccttcgattccctctgcggagccggaatc
gcgtttaagctttcacaggcgttgatcggcgacgcggcgcttgaaatgatcgatattgca
gcacttgcaaccattgcggatattgtgccattgcttggggaaaaccgcgccatcgcagcg
ctgggccttcgtcgtctcaacgaggatccgaatcccgggatcggcgcgctgataaaaaaa
gcatgcgtcaagcgcacttccaatatcgatgcgcagaccgtgtcgttcgtgcttgccccg
cgcatcaatgccgcgggcaggatttccacagcaaaggtcgcctttgaacttttgacagaa
aacgactccgcgaggctcgagcaacttgcggaagagctctgctcccttaatacagacagg
cagcagcggcaggaaaaggttgttgccgaggcgatgaaaatgcaggaagaaagcggggat
tccgatcataaggtgatcgtcctttataaacacgattgggatattgggatcgtcgggctt
gctgcttccaaggtctctgaacgctatgtgaagccgacgattcttcttggcgaatctgag
ccaggcgtctacaccggttctgcgcgaagcattcccggcgttaatatttatgaggcattg
aattctcaggcaaaggtatacgaaaaattcggaggacatgcaggagcggcgggccttacc
attcgtgaagagcacctcccgcagttaatccaccgtttaaacgaattcctaaaagagcat
tatgatgaagaggtgttcaagccccttaagacatacgatcttggaatcaccccgtcagag
gtatcgaattcattgatttcggaacttgaaatgctccgcccgtttggtttcaaaaatgaa
caggtagagcttttaataagcggtgcgcacatcgaagatattcggtcgattggcgaagat
aagcatgcaaaattccgtatcgcaaagggcggaagagccgtgaatgccgtaatcttcggc
acgcaggccgccgcggttccagggtatgcggatatcgtgggcacgcttaatatcaataca
tttgacatgaagccgcagatgattgtaagtacgctttcctatgacgagccatttgaacac
aagatgcggcagacgcaggaatatttgcgaaaggcggcagtgccaactgaagccgaacga
aacgctttttttatcggccgtgaaggcctgctcggggtttatgcgattttaaaaaacgtc
agcgaaaagaaagctttttttccggacgaggaaaaacttgtccggttcctgcagaaatat
gccgccgagttcacggatgaaaaaattatatttgcgctgaccgtgtttgaggaaataggt
ttgctagaaatacaaaaaaatgatagaatacacattgtgatacgttccggaaaacgtgag
ctttccgacagtgcggtatatcaaaagtttggttcaggggagaaataa
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