Christensenella minuta: B1H56_04075
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Entry
B1H56_04075 CDS
T05665
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
cmiu
Christensenella minuta
Pathway
cmiu03030
DNA replication
cmiu03430
Mismatch repair
cmiu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cmiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B1H56_04075 (polC)
03430 Mismatch repair
B1H56_04075 (polC)
03440 Homologous recombination
B1H56_04075 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmiu03032
]
B1H56_04075 (polC)
03400 DNA repair and recombination proteins [BR:
cmiu03400
]
B1H56_04075 (polC)
Enzymes [BR:
cmiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B1H56_04075 (polC)
DNA replication proteins [BR:
cmiu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B1H56_04075 (polC)
DNA repair and recombination proteins [BR:
cmiu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B1H56_04075 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
RNase_T
DNA_pol3_finger
HHH_6
DEDDh_C
Rv2179c-like
RNase_H_2
HHH_3
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AYH39725
LinkDB
All DBs
Position
complement(843276..847658)
Genome browser
AA seq
1460 aa
AA seq
DB search
MEAYDSGACKGKERRTLNALIKNLTKVIDKINKDKRFSNLIQFDRVEFISEEGVLKVFFK
TTEHLSPFDFLKAKRELEESCDAKVRVSLDQSHYASELFGEEKILEQYLKDYLILSEPTV
MPFIQPAKITQDDRILEICCTSKMAEGIVSTMKLNTLSEHFLRDIYGVNRGVRISISEDA
NSGYEPSAEVQKAICSQNMAPKRTVRPAESREPAPPPWEAPPVQEKEEMQAPSADPAAGT
PRKTAQQGAVTKMCDLKPDTRITIEGEVVYTEDKELKNGELIKHKFVLSDYTSSITCFFL
ESNKYKTRLVPPKKGQWVVVTGLCADDSFEHEKTVKAQKIERSNHKDREDKAGSKRVELH
VHTQMSAQDAVSDVKKIVARAAKWGHKAIAITDHGVVQAFPDAANAAKANGIHLIYGVEG
YMVDDSKRIYDSDAPKGFQDEYVVFDIETTGLSHINCDITEIGAVRVVNGELTDRFQTFV
RPGGPIPPKIVSLTGINDDMVKDAPLPEVALAEFRQFCGDNAVLVAHNSDFDTKFIFHKS
QQFGITYGNTVVDSLALCRLALPKLKNHKLNTVAAHLHIPLEHHRAVNDAVCTAKIMLEC
FREFEKQGVQDMQGVNQMFAEHANGKNAKTYHIILLCKNKRGLKNLYKLVSFAHLDYFYR
KPRMPKSVIDAHREGLIIGSACEAGELYQAMLAGADEKKLAKIASFYDYLEIQPTANNEF
MVKKGILANNEDIRRINRRIVELGRKLDKPTVATCDVHFLDPHEEYFRRIIFQIQGYDDT
GQAPLYLRTTDEMLREFAYLGEETAYEVVVENSNKIADMTEEIELFQSETAMPSLPNAAE
NITELAFRTAKEKYGDPLPELIEARLKRELDSIVSHGFSVLYYSAHLLVKKSNEDGYLVG
SRGSVGSSLAATMTGITEVNPLPPHYVCPKCKHSDFDIDKEKYPSGVDLPDAVCPECGTK
YLKDGYDIPFEVFLGIDADKVPDIDLNFSGEYQPTAHKYTEVMFGKGHVFRAGTISAVKD
KIAYGYVKKFLEQTGTQANEAEVNRLVQGVSGVKKTTGQHPGGIVIVPHDMEVYDFTPVQ
KPADSAEAEWVTTHFDFNSMHDILIKLDILGHDVPTIIRLLQDATGIDPLTIPLDDKPTM
ELFSGLGPLGLKSKDLLGIQTGTLGIPEFGTKFVRQMLMDTKPTTMSEIVRISGLSHGTD
VWLGNAQDLIKAGTCTLKEAICTRDDIMNYLVDKGVEKRMAFFIMEATRKGKVAKNGFTE
DMQRALDDAHIADWFVESCKKIKYMFPKAHAVAYVIMAYRIAYCKVHYPEAFYSSYFTVR
SNDFDASYVLGGLDDIKKNWQMIENNGNATANEKNMATMLEVACEMYLRGYHFLPVDLNR
SDAEKFLIEEGGLRLPFLSIPKLGGNAAAKVVEEREKGAFISIEDLRKRAKLSSSVIDEM
QKMGTLTGLSQTNQLSLFDF
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
attgaggcgtatgattctggagcttgcaaaggaaaggaacgaagaacgttgaacgcgctt
ataaaaaatcttacaaaagtgatcgacaaaattaacaaagataagcgtttttcaaatcta
atacagtttgaccgggtagaatttatttcggaagaaggggtgctgaaagtatttttcaaa
acgacggagcatctctcgccctttgactttttaaaagcaaagcgcgaattggaagaatcc
tgcgacgcaaaggtaagagtctcgcttgaccaatcgcattacgcatccgaactgttcgga
gaagaaaaaattttggagcaatatctgaaggattacctgattctgtcggaacctactgtt
atgccctttatccaaccggcaaaaataacgcaggacgaccggattttggaaatttgctgc
acgtcaaaaatggcagagggtattgtcagtacaatgaagcttaatacgctttctgagcac
tttctgcgcgatatatacggagtgaacaggggagtgcgcatcagtatttccgaagacgcc
aatagcggctatgaaccttccgctgaagtacagaaggcgatttgttcgcagaatatggct
cccaaacgcacagtgcgtccggctgaaagccgcgaaccggcgccgccgccgtgggaggcc
ccgccggttcaggaaaaggaagagatgcaggccccgtctgccgatccggcggcgggaacg
ccaagaaagacagctcagcagggcgctgttacaaaaatgtgcgacctcaagcccgacacc
cgtatcacaatcgagggagaggttgtctatacggaagacaaagaattgaaaaatggggaa
cttatcaagcacaagtttgtgctttctgattacacctccagtatcacttgcttctttttg
gagagcaataaatataagacgcggctcgtaccgccgaaaaagggccagtgggtcgttgtg
acgggcctgtgcgcggacgacagctttgaacacgagaaaacggttaaggcgcaaaaaatt
gagagatcaaaccacaaagaccgcgaggacaaggccggttcaaaacgtgtggagttacat
gttcatacgcagatgtctgcgcaggacgctgtttctgatgtcaaaaagattgttgcccgc
gctgcaaagtgggggcataaagcgatcgccattacagatcacggcgttgtacaggcattt
cccgatgccgccaatgcggccaaggcaaacgggatacatctgatctacggcgtagaagga
tatatggtcgacgactcgaagcgcatctatgactcggacgctcccaaaggatttcaggac
gaatatgtggtgtttgatatcgaaaccacgggactttcccatattaactgcgatatcacc
gaaattggcgctgtacgcgttgtaaacggtgaacttacagaccgctttcaaacgtttgta
cggcctggcgggccgattccccctaagattgtatcactgacggggatcaatgacgatatg
gtaaaggatgccccccttcctgaggtcgcattggccgaattccggcagttttgcggtgat
aacgcagtacttgtcgcacataattcggatttcgatacgaagtttattttccacaaatcc
caacaattcggtatcacgtacgggaatacggtcgtggactcccttgctttatgccgcctt
gccttgcctaagcttaaaaaccataagctgaatacggtagcggcacatttgcacattccg
ctcgagcaccaccgtgctgtgaacgatgcggtatgtactgccaaaattatgctcgaatgt
ttccgcgaatttgaaaaacaaggcgtacaggatatgcagggcgtgaaccaaatgttcgca
gagcatgcgaacgggaaaaatgcaaaaacttaccatattatcctcttatgcaaaaataag
cgggggctgaagaatctctataagttggtatcctttgcacatcttgactatttttaccgc
aagccacgtatgccaaaaagcgtgatcgacgcgcatcgggaaggccttattatcggatct
gcctgcgaagcgggcgaactttatcaggcgatgctcgcgggcgctgacgaaaagaagctg
gcaaaaatcgcttctttttacgattaccttgagatacagcccacggccaacaatgaattt
atggtaaaaaagggaatccttgccaataacgaggatatccggcgtatcaataggcggatt
gtggaactcggaaggaaactggacaagccaaccgttgcgacatgcgacgtacattttctt
gatccgcacgaggagtatttccgccggatcattttccagatacagggctacgatgatacc
gggcaggcaccgctgtatttgcgtacaacggatgaaatgctcagggaatttgcatatctg
ggagaagagacggcctatgaagtcgttgttgagaattccaataaaattgcagacatgacg
gaggaaattgaactttttcagtcggaaacggcaatgcccagcctgccaaacgcagcggaa
aatattacggagcttgcattcagaacggctaaggaaaaatatggagatccgcttcctgag
ttgatagaggcccgcctgaagcgcgaactggactctatcgtttcccacgggttctcggtt
ttgtattacagcgcccatttgctggttaagaaatctaatgaagacggatacctcgttggt
tcgagggggtcggtcggctccagccttgccgctacgatgacgggaatcacggaggtcaat
cccttgccgccgcattacgtatgcccgaaatgcaaacattcggatttcgacatcgataag
gaaaaatatccttccggcgtcgatttgcccgatgcggtatgtccggaatgcggcacaaaa
tacctgaaagacggatatgatattccctttgaggtcttcctcgggatcgatgcggataaa
gtgcccgacattgacctcaatttctcgggggaataccagccgaccgcacataaatacacg
gaagtgatgtttggcaaggggcatgtgtttcgggccggtacaatcagcgccgtgaaagac
aagatcgcctatggatacgttaagaagttcctggagcaaacggggacgcaggcgaatgaa
gcggaggtcaaccgccttgtgcagggggtttccggcgtgaagaaaacgacggggcaacat
cccggcggaattgtgatcgtgccgcacgacatggaagtttatgattttactcccgtgcaa
aaaccggcagattcagcggaagcggaatgggtcacgacacattttgatttcaactccatg
catgacatcctgattaaactcgatatcctcggccatgatgtgccgactatcatcaggctc
ctacaggatgctacgggaattgacccgctcacgatcccgctggatgataaaccgacgatg
gaattgttctccggtctggggccgctggggttgaaatcaaaggatttgctgggaatacag
acagggacgctcggcatccctgagttcggcacaaaatttgtacgccagatgctgatggat
acgaagccgacaacaatgtctgaaatcgtgcggatcagcggcctgtcccacggtacggat
gtgtggttgggaaacgcgcaggacctgatcaaagcagggacctgcacactgaaggaagca
atctgtacgcgcgacgacatcatgaactacctggtggataaaggcgtggagaagcgaatg
gcattctttatcatggaagctacccgtaagggcaaggtcgcgaaaaacggattcacggaa
gacatgcaaagagcgcttgacgacgcgcatattgcggactggttcgttgaatcctgtaag
aagatcaaatatatgttcccaaaggcgcacgccgtggcctatgttatcatggcataccgc
atcgcctactgcaaggtgcattacccggaggcattctattcctcttatttcacggttcgc
tccaatgactttgatgcgtcctatgttctcggcgggctggacgacatcaaaaagaactgg
caaatgatcgagaacaatggaaatgcgacagcgaatgagaagaacatggcaaccatgctc
gaggtggcttgtgaaatgtatctgcgtggctatcatttcctgccggtagacctgaaccgt
tctgatgcggaaaaattcctgatcgaagaggggggactgcgcctgccgttcctttctatt
ccgaaactgggtggtaacgcggcggcaaaagtggtggaagagcgcgagaaaggagctttt
atctccatagaagacctgcggaaacgcgctaagctttcctcttccgtaattgatgagatg
cagaaaatgggaacgcttaccggcctttcacagaccaatcagctgagtctcttcgatttt
tag
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integrated database retrieval system
