Christensenella minuta: B1H56_05025
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Entry
B1H56_05025 CDS
T05665
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
cmiu
Christensenella minuta
Brite
KEGG Orthology (KO) [BR:
cmiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmiu03021
]
B1H56_05025
Transcription machinery [BR:
cmiu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B1H56_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
DUF7645
GerE
HTH_23
HTH_Tnp_ISL3
KORA
HTH_37
LUC7
2Fe-2S_thioredx
LexA_DNA_bind
IF2_N
Trp_repressor
Phage_CII
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AYH39889
LinkDB
All DBs
Position
complement(1037169..1037912)
Genome browser
AA seq
247 aa
AA seq
DB search
MADYTKMDSDELFKLYVKNHDVDIRNILIERYLYIAEIAAKKFAGRGVDYEDLFQVASLA
LVKAIERFEPEREIKFSSYATPSLIGEIKNYFRDSSRVMRLPRRDTEQLKKIKLYTQEYM
ARNGKKPSPREIAEEMDLSVERVLEVLEMQQADNILSLDSALAADSENFSLGNVLGQEDA
SFEHVENHDFINYCMSLLNDTEKKIIEQRYLGNKTQKQVADMLNVSQMQVSRMERKILNK
LAMVYKK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtggcggattatacgaaaatggacagcgacgagctgtttaagctatatgtaaaaaatcat
gatgtagacatcaggaatatattgattgagcggtatttgtatatcgcagaaatcgccgca
aaaaaatttgcgggccggggagtagattatgaagacctttttcaggttgcgagtcttgcg
cttgtaaaggcgatcgagcgttttgagccggaacgggaaattaaattttccagttatgca
actccatccctgattggcgagatcaaaaactatttcagggattcgtcgagggtaatgcgt
cttccgcggcgggatacggagcagctgaaaaagatcaagctgtatacgcaggaatatatg
gcgcgcaatgggaaaaagccgtcgccgcgggaaattgcggaggagatggacctttctgtg
gaacgcgtgctcgaagtgcttgaaatgcagcaggccgataatattctatcgcttgacagc
gcgcttgcggcggacagtgaaaatttttccctcggaaatgttctcggccaggaagatgcg
agcttcgagcatgttgaaaaccatgattttatcaattactgtatgagtcttttgaatgat
acggaaaaaaagatcatcgagcagcgttaccttgggaacaaaacgcagaaacaggtcgcg
gatatgttgaatgtttcgcagatgcaggtatcgcgcatggagagaaaaatcctcaacaag
ttggcgatggtatataaaaaatag
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